RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 OR52E5Q8NH55 327 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 COQ8AQ8NI60 647 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 DCANP1Q8TF63 244 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 PPP1R14BQ96C90 147 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 SCGB3A2Q96PL1 93 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 RAB40CQ96S21 281 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 PRRT1Q99946 306 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 RNF126Q9BV68 326 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 PBDC1Q9BVG4 233 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 NAA60Q9H7X0 242 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 MRPL36Q9P0J6 103 aaKnown RBP5.63□□□□□ -1.51
VPS50-203ENST00000436177 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 KCNIP3Q9Y2W7 256 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 HERC2O95714 4834 aa5.63□□□□□ -1.51
VPS50-203ENST00000436177 DEFB131BA0A096LNP1 70 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 PIGBOS1A0A0B4J2F0 54 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 TEX48A0A1B0GUV7 120 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 ZFP92A6NM28 416 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 ZNF705EA8MWA4 302 aaPredicted RBP5.62□□□□□ -1.51
VPS50-203ENST00000436177 H3BS24 57 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 NXPH3O95157 252 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 CDS2O95674 445 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 AKAIN1P0CW23 69 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 P0DMU3 169 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 EMP1P54849 157 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 SRPXP78539 464 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 IL18Q14116 193 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 AARDQ4LEZ3 155 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 C2orf83Q53S99 150 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 FAAP20Q6NZ36 180 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 C16orf54Q6UWD8 224 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 UBE2DNLQ8IWF7 75 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 GLMPQ8WWB7 406 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 NPIPB3Q92617 1050 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 SLC35E1Q96K37 410 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 NDUFAF3Q9BU61 184 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 SCP2D1Q9UJQ7 156 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
VPS50-203ENST00000436177 IGHV3OR16-12A0A075B7B8 117 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 TMEM189A5PLL7 270 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 CRYM-AS1A6NIL9 109 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 NOL3O60936 208 aaKnown RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 TOMM40O96008 361 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 AMBPP02760 352 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 ANXA3P12429 323 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 KLF9Q13886 244 aaPredicted RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 USF2Q15853 346 aaPredicted RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 SAMD13Q5VXD3 122 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 OR8G2PQ6IF36 304 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 Q6ZRM9 215 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 GPR141Q7Z602 305 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 SELENOHQ8IZQ5 122 aaKnown RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 LGI3Q8N145 548 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 OR51G1Q8NGK1 321 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 DTD1Q8TEA8 209 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 GLYATL2Q8WU03 294 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 SMIM4Q8WVI0 70 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 IL22RA2Q969J5 263 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 RNF125Q96EQ8 232 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 LINC00052Q96N35 136 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 MCUBQ9NWR8 336 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 RABL2AQ9UBK7 228 aaPredicted RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 PAIP2BQ9ULR5 123 aaKnown RBP5.61□□□□□ -1.51
VPS50-203ENST00000436177 RABL2BQ9UNT1 228 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 U3KQ87 197 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 X6R8D5 127 aa5.61□□□□□ -1.51
VPS50-203ENST00000436177 H3BMM0 161 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 IFNA21P01568 189 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 IGKV3-20P01619 116 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 PSG1P11464 419 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 HLA-DRB4P13762 266 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 AKR1C4P17516 323 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 NKX2-1P43699 371 aaPredicted RBP5.6□□□□□ -1.51
VPS50-203ENST00000436177 CCR6P51684 374 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 LYZP61626 148 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 SMCO1Q147U7 214 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 CTF1Q16619 201 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 NMSQ5H8A3 153 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 EBLN2Q6P2I7 272 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 ZNF767PQ75MW2 155 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 OR4B1Q8NGF8 309 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 OR51S1Q8NGJ8 323 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 OR4C16Q8NGL9 310 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 OR1S1Q8NH92 325 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 LHFPL5Q8TAF8 219 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 GPR146Q96CH1 333 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 DIRAS2Q96HU8 199 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 C7orf50Q9BRJ6 194 aaKnown RBP5.6□□□□□ -1.51
VPS50-203ENST00000436177 RTBDNQ9BSG5 229 aaPredicted RBP5.6□□□□□ -1.51
VPS50-203ENST00000436177 NAA50Q9GZZ1 169 aaKnown RBP5.6□□□□□ -1.51
VPS50-203ENST00000436177 CELA1Q9UNI1 258 aa5.6□□□□□ -1.51
VPS50-203ENST00000436177 GOLT1BQ9Y3E0 138 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms