RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ROBO3Q96MS0 1386 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 TNCP24821 2201 aa0.05□□□□□ -2.4
LINC01239-201ENST00000433645 MUC4Q99102 2169 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 K7EIL1 84 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 TNNC2P02585 160 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 SERPINA6P08185 405 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 NKX2-5P52952 324 aaPredicted RBP0.04□□□□□ -2.4
LINC01239-201ENST00000433645 KRTAP26-1Q6PEX3 210 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 KRT222Q8N1A0 295 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 TMEM254Q8TBM7 123 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 HIST1H2BLQ99880 126 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 LINC00467Q9BRT7 94 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 CCDC90BQ9GZT6 254 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 ORMDL1Q9P0S3 153 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 VPS29Q9UBQ0 182 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 PKIGQ9Y2B9 76 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 NOSIPQ9Y314 301 aaKnown RBP0.04□□□□□ -2.4
LINC01239-201ENST00000433645 ZDBF2Q9HCK1 2354 aa0.04□□□□□ -2.4
LINC01239-201ENST00000433645 OBSL1O75147 1896 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 TLCD2A6NGC4 264 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 OR2T8A6NH00 312 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 IFNA16P05015 189 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 IAH1Q2TAA2 248 aaPredicted RBP0.03□□□□□ -2.4
LINC01239-201ENST00000433645 CDKL4Q5MAI5 379 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 GRINAQ7Z429 371 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 EXOC3-AS1Q8N2X6 119 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 GDPD1Q8N9F7 314 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 ADAT3Q96EY9 351 aaPredicted RBP0.03□□□□□ -2.4
LINC01239-201ENST00000433645 GPER1Q99527 375 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 TLNRD1Q9H1K6 362 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 BCL2L10Q9HD36 194 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 UNC13CQ8NB66 2214 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 SIP14410 1827 aa0.03□□□□□ -2.4
LINC01239-201ENST00000433645 RIMBP3CA6NJZ7 1639 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 RIMBP3BA6NNM3 1639 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 PHRF1Q9P1Y6 1649 aaKnown RBP0.02□□□□□ -2.41
LINC01239-201ENST00000433645 RIMBP3Q9UFD9 1639 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 TGIF2-C20orf24A0A0A6YYL0 155 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 TCRBV4S1A1TA0A5B7 111 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 C8orf74Q6P047 294 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 HAGHLQ6PII5 290 aaPredicted RBP0.02□□□□□ -2.41
LINC01239-201ENST00000433645 C2orf82Q6UX34 121 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 ST6GALNAC3Q8NDV1 305 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 BORCS7Q96B45 105 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 LINC00052Q96N35 136 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 LYSMD1Q96S90 227 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 TNFSF18Q9UNG2 199 aa0.02□□□□□ -2.41
LINC01239-201ENST00000433645 BDP1A6H8Y1 2624 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 SYNE1Q8NF91 8797 aaKnown RBP0.01□□□□□ -2.41
LINC01239-201ENST00000433645 PPIBP23284 216 aaKnown RBP0.01□□□□□ -2.41
LINC01239-201ENST00000433645 FOXA3P55318 350 aaPredicted RBP0.01□□□□□ -2.41
LINC01239-201ENST00000433645 IMPG1Q17R60 797 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 CT55Q8WUE5 264 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 TP53RKQ96S44 253 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 CMSS1Q9BQ75 279 aaKnown RBP0.01□□□□□ -2.41
LINC01239-201ENST00000433645 TMEM133Q9H2Q1 129 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 C14orf105Q9NVL8 296 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 UBAP1Q9NZ09 502 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 UTP11Q9Y3A2 253 aaKnown RBP0.01□□□□□ -2.41
LINC01239-201ENST00000433645 NCOA1Q15788 1441 aa0.01□□□□□ -2.41
LINC01239-201ENST00000433645 CLDN24A6NM45 220 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 AHSA1O95433 338 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 HOXA6P31267 233 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 SPINK7P58062 85 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 COTL1Q14019 142 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 C12orf74Q32Q52 190 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 ATOH7Q8N100 152 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 CLDN22Q8N7P3 220 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 WFDC5Q8TCV5 224 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 SLAMF6Q96DU3 332 aa0□□□□□ -2.41
LINC01239-201ENST00000433645 RTL1A6NKG5 1358 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 FAM236DA0A1B0GTK5 79 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 FAM236CP0DP71 79 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 ZNF833PQ6ZTB9 187 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 Q8IYB0 196 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 OR10AC1Q8NH08 325 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 FAM172AQ8WUF8 416 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 PSMF1Q92530 271 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 C8orf76Q96K31 380 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 TVP23BQ9NYZ1 205 aa-0.01□□□□□ -2.41
LINC01239-201ENST00000433645 CECR2Q9BXF3 1484 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 hADV38S2A0JD32 116 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 SMIM23A6NLE4 172 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 KLF7O75840 302 aaPredicted RBP-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 GADD45GO95257 159 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 CNIH1O95406 144 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 C8GP07360 202 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 RNASE4P34096 147 aaKnown RBP-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 OMPP47874 163 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 DYNLT1P63172 113 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 Q6Q795 121 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 Q6ZS92 163 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 SLC30A7Q8NEW0 376 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 OR2T35Q8NGX2 323 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 CANT1Q8WVQ1 401 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 PRADC1Q9BSG0 188 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 TAS2R7Q9NYW3 318 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 IDI2-AS1Q9NZ38 188 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 TET1Q8NFU7 2136 aa-0.02□□□□□ -2.41
LINC01239-201ENST00000433645 SCN8AQ9UQD0 1980 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms