RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 I3L2K1 104 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 ORM2P19652 201 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 HES1Q14469 280 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 FXYD3Q14802 87 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 C5orf64Q2M2E5 130 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 LHFPL4Q7Z7J7 247 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 OR1B1Q8NGR6 318 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 TMEM190Q8WZ59 177 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 GAR1Q9NY12 217 aaKnown RBP10.19□□□□□ -0.78
DDX56-204ENST00000431640 IL36BQ9NZH7 164 aa10.19□□□□□ -0.78
DDX56-204ENST00000431640 GGTLC3B5MD39 225 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 ZFP36P26651 326 aaKnown RBP10.18□□□□□ -0.78
DDX56-204ENST00000431640 CNN1P51911 297 aaKnown RBP10.18□□□□□ -0.78
DDX56-204ENST00000431640 S100A12P80511 92 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 KLRD1Q13241 179 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 CENPWQ5EE01 88 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 ZNF562Q6V9R5 426 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 FXYD5Q96DB9 178 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 OSTCQ9NRP0 149 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 C1RLQ9NZP8 487 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 TRAV30A0A087WSZ9 112 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 IGHV2-70DA0A0C4DH43 119 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 TOX4O94842 621 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 GCGP01275 180 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 APELAP0DMC3 54 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 PAX1P15863 534 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 HOXB4P17483 251 aaPredicted RBP10.18□□□□□ -0.78
DDX56-204ENST00000431640 UBE2E1P51965 193 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 ERVFC1-1P60608 527 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 ACTL10Q5JWF8 245 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 MORN5Q5VZ52 161 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 S100A7AQ86SG5 101 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 LPAR2Q9HBW0 351 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 CDC42EP3Q9UKI2 254 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 HIGD1AQ9Y241 93 aa10.18□□□□□ -0.78
DDX56-204ENST00000431640 AKAP9Q99996 3911 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 ANKRD17O75179 2603 aaKnown RBP10.17□□□□□ -0.78
DDX56-204ENST00000431640 ITPR2Q14571 2701 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 NPIPB5A8MRT5 1133 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 K7EN84 100 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 ISLRO14498 428 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 HNF1AP20823 631 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 CLEC12BQ2HXU8 276 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 RPEL1Q2QD12 228 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 ZNF329Q86UD4 541 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 KRTAP1-3Q8IUG1 177 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 RNF24Q9Y225 148 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 DMRT1Q9Y5R6 373 aa10.17□□□□□ -0.78
DDX56-204ENST00000431640 NBEAP1P0C6P0 100 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 PYYP10082 97 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 PSG1P11464 419 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 BRS3P32247 399 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 PDLIM4P50479 330 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 ATP5J2P56134 94 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 LMO4P61968 165 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
DDX56-204ENST00000431640 HIST3H2BBQ8N257 126 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 TTC9CQ8N5M4 171 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 Q8N6K4 173 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 BPESC1Q9GZL8 116 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 THYN1Q9P016 225 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 TMEM14CQ9P0S9 112 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 TRAPPC1Q9Y5R8 145 aa10.16□□□□□ -0.78
DDX56-204ENST00000431640 IGHV3-21A0A0B4J1V1 117 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 A0A1W2PRD5 423 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 A0A1W2PRF3 423 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 A0A1W2PRM7 423 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 NCBP2LA6PVI3 153 aaKnown RBP10.15□□□□□ -0.78
DDX56-204ENST00000431640 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 TMEM11P17152 192 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 MYCNOSP40205 109 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 YPEL3P61236 119 aaPredicted RBP10.15□□□□□ -0.78
DDX56-204ENST00000431640 COX19Q49B96 90 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 TMEM183AQ8IXX5 376 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 ARPC1AQ92747 370 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 SMIM12Q96EX1 92 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 IGF2BP2-AS1Q96M15 143 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 ZNF48Q96MX3 618 aaPredicted RBP10.15□□□□□ -0.78
DDX56-204ENST00000431640 CHRDL1Q9BU40 450 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 EPDR1Q9UM22 224 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 POLR3KQ9Y2Y1 108 aaPredicted RBP10.15□□□□□ -0.78
DDX56-204ENST00000431640 ABCA2Q9BZC7 2435 aa10.15□□□□□ -0.78
DDX56-204ENST00000431640 IGHV4-30-2A0A087WSY4 118 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 VWC2LB2RUY7 222 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 K7EIM0 57 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 PEX7O00628 323 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 SCGB2A1O75556 95 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 RPL15P61313 204 aaKnown RBP10.14□□□□□ -0.79
DDX56-204ENST00000431640 CX3CL1P78423 397 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 DEFB113Q30KQ7 82 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 C19orf35Q6ZS72 473 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 TMEM68Q96MH6 324 aa10.14□□□□□ -0.79
DDX56-204ENST00000431640 RBM14Q96PK6 669 aaKnown RBP10.14□□□□□ -0.79
DDX56-204ENST00000431640 MRPL27Q9P0M9 148 aaKnown RBP10.14□□□□□ -0.79
DDX56-204ENST00000431640 V9GYV3 84 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms