RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 C22orf39Q6P5X5 142 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 OR11H6Q8NGC7 330 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 BORCS5Q969J3 196 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 TEX37Q96LM6 180 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 AMELYQ99218 206 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 TLNRD1Q9H1K6 362 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 TMEM133Q9H2Q1 129 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 C14orf105Q9NVL8 296 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 TP73-AS1Q9UF72 201 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 PRELID3BQ9Y3B1 194 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 LY96Q9Y6Y9 160 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 V9GYY5 206 aaPredicted RBP0.5□□□□□ -2.33
CDC40-204ENST00000431461 RP1P56715 2156 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 TAF1LQ8IZX4 1826 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 LAMB4A4D0S4 1761 aa0.5□□□□□ -2.33
CDC40-204ENST00000431461 ROBO3Q96MS0 1386 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 FAM236DA0A1B0GTK5 79 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 FAM159BA6NKW6 160 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 C17orf112F2Z3M2 114 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 TCRBP04435 133 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 FAM236CP0DP71 79 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 CNBPP62633 177 aaKnown RBP0.49□□□□□ -2.33
CDC40-204ENST00000431461 RANP62826 216 aaKnown RBP0.49□□□□□ -2.33
CDC40-204ENST00000431461 FADDQ13158 208 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 ITGB3BPQ13352 177 aaPredicted RBP0.49□□□□□ -2.33
CDC40-204ENST00000431461 RRN3P1Q2M238 152 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 SCGB2B2Q4G0G5 96 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 RNASE10Q5GAN6 216 aaKnown RBP0.49□□□□□ -2.33
CDC40-204ENST00000431461 TEX261Q6UWH6 196 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 ST6GALNAC3Q8NDV1 305 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 SLC30A7Q8NEW0 376 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 OR52L1Q8NGH7 329 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 SIGMAR1Q99720 223 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 TMEM70Q9BUB7 260 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 BCL2L10Q9HD36 194 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 UQCC1Q9NVA1 299 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 ORMDL1Q9P0S3 153 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 TMEM14CQ9P0S9 112 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 HSPB8Q9UJY1 196 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 UTP11Q9Y3A2 253 aaKnown RBP0.49□□□□□ -2.33
CDC40-204ENST00000431461 U3KQ87 197 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 ECM29Q5VYK3 1845 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 TNRC6BQ9UPQ9 1833 aaKnown RBP0.49□□□□□ -2.33
CDC40-204ENST00000431461 CACNA1BQ00975 2339 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 POLEQ07864 2286 aa0.49□□□□□ -2.33
CDC40-204ENST00000431461 TCRBV4S1A1TA0A5B7 111 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 CCDC160A6NGH7 325 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 CCL16O15467 120 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 NUPR1O60356 82 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 SMIM17P0DL12 118 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 LSM6P62312 80 aaKnown RBP0.48□□□□□ -2.33
CDC40-204ENST00000431461 REEP5Q00765 189 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 PSG9Q00887 426 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 C4orf22Q6V702 233 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 LINC00322Q6ZN03 302 aaPredicted RBP0.48□□□□□ -2.33
CDC40-204ENST00000431461 GKN2Q86XP6 184 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 PLPP5Q8NEB5 264 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 OR2T35Q8NGX2 323 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 SLC25A40Q8TBP6 338 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 SLAMF6Q96DU3 332 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 OBSCN-AS1Q96MR7 158 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 LYSMD1Q96S90 227 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 PRADC1Q9BSG0 188 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 IDI2-AS1Q9NZ38 188 aa0.48□□□□□ -2.33
CDC40-204ENST00000431461 EML6Q6ZMW3 1958 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 TRAV4A0A0B4J268 109 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 TRBV6-4A0A1B0GX49 114 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 TMEM210A6NLX4 147 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 C1orf196B1AJZ1 125 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 SERPINA1P01009 418 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 OR10J4P0C629 311 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 DSCR4P56555 118 aaPredicted RBP0.47□□□□□ -2.33
CDC40-204ENST00000431461 PIGPP57054 158 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 HSPE1P61604 102 aaKnown RBP0.47□□□□□ -2.33
CDC40-204ENST00000431461 DYNLT1P63172 113 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 EIF5AL1Q6IS14 154 aaKnown RBP0.47□□□□□ -2.33
CDC40-204ENST00000431461 TEN1Q86WV5 123 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 OR10X1Q8NGY0 326 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 OR10AC1Q8NH08 325 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 PATE1Q8WXA2 126 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 PRAP1Q96NZ9 151 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 SLC25A21Q9BQT8 299 aaPredicted RBP0.47□□□□□ -2.33
CDC40-204ENST00000431461 CDC42SE1Q9NRR8 79 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 TNFSF18Q9UNG2 199 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 ARL5AQ9Y689 179 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 PEAK1Q9H792 1746 aa0.47□□□□□ -2.33
CDC40-204ENST00000431461 CCDC88AQ3V6T2 1871 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 KIF1BO60333 1816 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 IGHV1-58A0A0C4DH39 117 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 E7EUB6 86 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 NCR3O14931 201 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 NDUFB3O43676 98 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 TIMM17BO60830 172 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 NDUFC2O95298 119 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 LYPLA2O95372 231 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 APOA2P02652 100 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 CST2P09228 141 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 CTXN2P0C2S0 81 aa0.46□□□□□ -2.34
CDC40-204ENST00000431461 RNASE4P34096 147 aaKnown RBP0.46□□□□□ -2.34
CDC40-204ENST00000431461 UBE2BP63146 152 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms