RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 DNLZQ5SXM8 178 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 GSN-AS1Q9NRJ2 163 aa11.04□□□□□ -0.64
HOXC4-202ENST00000430889 XKRY2A2RUG3 117 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 PSG1P11464 419 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 CD24P25063 80 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 ERVFC1-1P60608 527 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 LMO4P61968 165 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 FXYD3Q14802 87 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 OR1L6Q8NGR2 347 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 LINC00479Q96M42 142 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 C7orf69Q9H7B7 122 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 MRPL27Q9P0M9 148 aaKnown RBP11.03□□□□□ -0.64
HOXC4-202ENST00000430889 TRAPPC1Q9Y5R8 145 aa11.03□□□□□ -0.64
HOXC4-202ENST00000430889 A0A1W2PRD5 423 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 A0A1W2PRF3 423 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 A0A1W2PRM7 423 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 CNIH1O95406 144 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 AMBPP02760 352 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 NDPQ00604 133 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 RPEL1Q2QD12 228 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 FAM231DQ6ZW35 169 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 MBD6Q96DN6 1003 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 FANCD2OSQ96PS1 177 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 RNASE7Q9H1E1 156 aaKnown RBP11.02□□□□□ -0.64
HOXC4-202ENST00000430889 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 KLF12Q9Y4X4 402 aa11.02□□□□□ -0.64
HOXC4-202ENST00000430889 ABCA1O95477 2261 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 FABP4P15090 132 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 CNN1P51911 297 aaKnown RBP11.01□□□□□ -0.65
HOXC4-202ENST00000430889 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 CDPF1Q6NVV7 123 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
HOXC4-202ENST00000430889 TBX15Q96SF7 602 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 TBL2Q9Y4P3 447 aaKnown RBP11.01□□□□□ -0.65
HOXC4-202ENST00000430889 SMIM27A0A1W2PRY6 76 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 FABP1P07148 127 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
HOXC4-202ENST00000430889 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
HOXC4-202ENST00000430889 ACACBO00763 2458 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 F8W735 103 aaPredicted RBP11□□□□□ -0.65
HOXC4-202ENST00000430889 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 HIST1H1BP16401 226 aaKnown RBP11□□□□□ -0.65
HOXC4-202ENST00000430889 ADMP35318 185 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 GNG5P63218 68 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 CX3CL1P78423 397 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 TTC9CQ8N5M4 171 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
HOXC4-202ENST00000430889 FAM103A1Q9BTL3 118 aaKnown RBP11□□□□□ -0.65
HOXC4-202ENST00000430889 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
HOXC4-202ENST00000430889 POLR3KQ9Y2Y1 108 aaPredicted RBP11□□□□□ -0.65
HOXC4-202ENST00000430889 TOMM40O96008 361 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 EGR2P11161 476 aaPredicted RBP10.99□□□□□ -0.65
HOXC4-202ENST00000430889 UBE2E1P51965 193 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 RANP62826 216 aaKnown RBP10.99□□□□□ -0.65
HOXC4-202ENST00000430889 HES1Q14469 280 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
HOXC4-202ENST00000430889 LEMD1Q68G75 181 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 ZNF600Q6ZNG1 722 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 OR8I2Q8N0Y5 310 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 ARPC1AQ92747 370 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 BPESC1Q9GZL8 116 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
HOXC4-202ENST00000430889 TRBV9A0A0B4J1U6 114 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 TRAV34A0A0B4J273 112 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 WI2-2373I1.2A0A1W2PRP0 233 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 PGPA6NDG6 321 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 TMEM8BA6NDV4 472 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 H3BRN7 92 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 CBLN1P23435 193 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 LYZP61626 148 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 Q8N9W7 124 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 BLNKQ8WV28 456 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 RBM14Q96PK6 669 aaKnown RBP10.98□□□□□ -0.65
HOXC4-202ENST00000430889 SHANK2-AS3Q9BTD1 123 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 WNK2Q9Y3S1 2297 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 IGHV7-81A0A0B4J1V7 117 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 MRPS12O15235 138 aaKnown RBP10.98□□□□□ -0.65
HOXC4-202ENST00000430889 TOX4O94842 621 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
HOXC4-202ENST00000430889 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 MGST1P10620 155 aaKnown RBP10.98□□□□□ -0.65
HOXC4-202ENST00000430889 CTAG1AP78358 180 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 ZNF491Q8N8L2 437 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 TMEM190Q8WZ59 177 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 ATG101Q9BSB4 218 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 GNB1LQ9BYB4 327 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 Q9H3A6 140 aa10.98□□□□□ -0.65
HOXC4-202ENST00000430889 ZNF586Q9NXT0 402 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms