RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SLC23A3Q6PIS1 610 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 SPSB3Q6PJ21 355 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 SLC22A18ASQ8N1D0 253 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 COQ2Q96H96 371 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 YPEL4Q96NS1 127 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 DEFB127Q9H1M4 99 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 IGHV3-7P01780 117 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 LRRC75A-AS1Q8N1F1 130 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 PLAURQ03405 335 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 CFHR5Q9BXR6 569 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 LHFPL6Q9Y693 200 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 M0QXV9 152 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 UQCRQO14949 82 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 IGKCP01834 107 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 MEOX1P50221 254 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 TMEM170BQ5T4T1 132 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 KLF13Q9Y2Y9 288 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 A0A1W2PRD5 423 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 MS4A18H0YCH9 400 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 PGLYRP1O75594 196 aaPredicted RBP6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 NDUFV3P56181 108 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 MS4A18Q3C1V0 323 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 RASL11BQ9BPW5 248 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 LAMA2P24043 3122 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 A0A1B0GX51 115 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 SLC25A16P16260 332 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 GUSBP11Q6P575 273 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 IGKV1D-42A0A075B6H8 117 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 ORM2P19652 201 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 CRISPLD2Q9H0B8 497 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 PLA2G3Q9NZ20 509 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 CCL11P51671 97 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 GCSAMQ8N6F7 178 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 TRGV8A0A0C4DH27 118 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 H7C1H1 209 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 HSPE1P61604 102 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 HIGD1AQ9Y241 93 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 USP34Q70CQ2 3546 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 CENPVL3A0A0U1RRI6 287 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 SRSF2Q01130 221 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 EGR4Q05215 589 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 Q6ZS52 159 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 OR2H1Q9GZK4 316 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 LOXL2Q9Y4K0 774 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 UCN2Q96RP3 112 aa6.3□□□□□ -1.4
SYNPO2-202ENST00000429713 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 PAQR4Q8N4S7 273 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 ZNF83P51522 516 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 RPP25LQ8N5L8 163 aaKnown RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 MAFAQ8NHW3 353 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 FZR1Q9UM11 496 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 A0A0C4DFX4 3053 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 APOHP02749 345 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 SCTP09683 121 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 PTCRAQ6ISU1 281 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 ASCL2Q99929 193 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 FBXL7Q9UJT9 491 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 IGLV3-21P80748 117 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 C15orf53Q8NAA6 179 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 TMEM54Q969K7 222 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 PTPRSQ13332 1948 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 IGHV1OR15-9A0A0B4J2B8 117 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 C5orf67F2Z3F1 127 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 H3BMM0 161 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 CXorf66Q5JRM2 361 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 SPINK14Q6IE38 97 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 AMN1Q8IY45 258 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 UBE2WQ96B02 151 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 CLEC7AQ9BXN2 247 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 HOXA4Q00056 320 aaPredicted RBP6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 LOC101059948A0A1B0GTJ6 334 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 M0R1B8 84 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 IZUMO4Q1ZYL8 232 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 FGFRL1Q8N441 504 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 ZNF355PQ9NSJ1 428 aa6.29□□□□□ -1.4
SYNPO2-202ENST00000429713 LINC01619G3V211 115 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 H3BT86 120 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 MOSP00540 346 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 QRFPP83859 136 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 PHF7Q9BWX1 381 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 CSN3P07498 182 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 LIFP15018 202 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 ACP7Q6ZNF0 438 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 A0A1W2PQF6 199 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 MDKP21741 143 aaPredicted RBP6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 SSMEM1Q8WWF3 244 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 NPC2P61916 151 aa6.28□□□□□ -1.4
SYNPO2-202ENST00000429713 BMPERQ8N8U9 685 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms