RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 C5orf64Q2M2E5 130 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
LDB3-205ENST00000429277 GSN-AS1Q9NRJ2 163 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 NHP2Q9NX24 153 aaKnown RBP10.53□□□□□ -0.72
LDB3-205ENST00000429277 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 ST6GALNAC3Q8NDV1 305 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 SSC4DQ8WTU2 575 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 ST6GALNAC6Q969X2 333 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 H3BUT2 72 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
LDB3-205ENST00000429277 LYNX1G3V0Z9 82 aa10.52□□□□□ -0.72
LDB3-205ENST00000429277 LYNX1P0DP58 116 aa10.52□□□□□ -0.72
LDB3-205ENST00000429277 FGFBP3Q8TAT2 258 aa10.52□□□□□ -0.72
LDB3-205ENST00000429277 RNF166Q96A37 237 aaPredicted RBP10.52□□□□□ -0.72
LDB3-205ENST00000429277 LDLRAD4O15165 306 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 PSG1P11464 419 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 TMEM155Q4W5P6 130 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 TMEM14EPQ6UXP3 125 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 MDS2Q8NDY4 140 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 RFNGQ9Y644 331 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 PSME4Q14997 1843 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 MYOFQ9NZM1 2061 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 OVOL2Q9BRP0 275 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 NDUFS8O00217 210 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 ITGB1BP1O14713 200 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 IGHG3P01860 377 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 CKS1BP61024 79 aa10.52□□□□□ -0.73
LDB3-205ENST00000429277 SAP30O75446 220 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 CD24P25063 80 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 S100A7L2Q5SY68 101 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 ZCCHC24Q8N2G6 241 aaKnown RBP10.51□□□□□ -0.73
LDB3-205ENST00000429277 RASL10AQ92737 203 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 TCRAP04437 139 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 NMSQ5H8A3 153 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 LOC285556D6RIA3 1793 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 ESPL1Q14674 2120 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 EFNA2O43921 213 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 GATA3P23771 443 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 VCYO14598 125 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 IGKV1D-8A0A087WSZ0 117 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 TMEM8BA6NDV4 472 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 A8MWV9 139 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 M0R2P5 195 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 MLNRO43193 412 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 MST1P26927 711 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 SRSF6Q13247 344 aaKnown RBP10.51□□□□□ -0.73
LDB3-205ENST00000429277 OR10W1Q8NGF6 305 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 GFI1Q99684 422 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 DERL1Q9BUN8 251 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 WFDC1Q9HC57 220 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 RNF114Q9Y508 228 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 OTOFQ9HC10 1997 aa10.51□□□□□ -0.73
LDB3-205ENST00000429277 SNRNP200O75643 2136 aaKnown RBP10.5□□□□□ -0.73
LDB3-205ENST00000429277 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 H0YJW9 148 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 TMEM95Q3KNT9 176 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 C1QL4Q86Z23 238 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 ERG28Q9UKR5 140 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 PCP4P48539 62 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BCP62807 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST2H2BEQ16778 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BHQ93079 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BNQ99877 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 HIST1H2BMQ99879 126 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 DOCK3Q8IZD9 2030 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 LINC00158P58513 81 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 LY6DQ14210 128 aa10.5□□□□□ -0.73
LDB3-205ENST00000429277 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 GAS1P54826 345 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 Q6ZS92 163 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 UBE2DNLQ8IWF7 75 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 CD177Q8N6Q3 437 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 TRIOBPQ9H2D6 2365 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 ZDBF2Q9HCK1 2354 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 UBE2CO00762 179 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 INSP01308 110 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 TDGF1P3P51864 188 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 TEX43Q6ZNM6 134 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 JPT2Q9H910 190 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 NEUROG3Q9Y4Z2 214 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 PSPNO60542 156 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 TOMM40O96008 361 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 AMBPP02760 352 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 FOXL2NBQ6ZUU3 175 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
LDB3-205ENST00000429277 H3BUX3 64 aa10.48□□□□□ -0.73
LDB3-205ENST00000429277 PDE6HQ13956 83 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms