RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 HIST1H2BDP58876 126 aa15.62■□□□□ 0.09
CASC4-203ENST00000429162 HIST1H2BCP62807 126 aa15.62■□□□□ 0.09
CASC4-203ENST00000429162 HIST2H2BEQ16778 126 aa15.62■□□□□ 0.09
CASC4-203ENST00000429162 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.62■□□□□ 0.09
CASC4-203ENST00000429162 HIST1H2BHQ93079 126 aa15.62■□□□□ 0.09
CASC4-203ENST00000429162 ZNF48Q96MX3 618 aaPredicted RBP15.62■□□□□ 0.09
CASC4-203ENST00000429162 HIST1H2BNQ99877 126 aa15.62■□□□□ 0.09
CASC4-203ENST00000429162 HIST1H2BMQ99879 126 aa15.62■□□□□ 0.09
CASC4-203ENST00000429162 TRAV30A0A087WSZ9 112 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 IGHV7-81A0A0B4J1V7 117 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 CENPVL3A0A0U1RRI6 287 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 PRB1P04280 392 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 GP9P14770 177 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 FOXL1Q12952 345 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 KLF17Q5JT82 389 aaPredicted RBP15.61■□□□□ 0.09
CASC4-203ENST00000429162 FANCD2OSQ96PS1 177 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 THYN1Q9P016 225 aa15.61■□□□□ 0.09
CASC4-203ENST00000429162 TOMM40O96008 361 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 CNN1P51911 297 aaKnown RBP15.6■□□□□ 0.09
CASC4-203ENST00000429162 TAS2R60P59551 318 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 IGF2BP2-AS1Q96M15 143 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 PEX7O00628 323 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 MFAP4P55083 255 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 CLEC12BQ2HXU8 276 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 PIP4P2Q8N4L2 257 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 FRZBQ92765 325 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 CDC42EP3Q9UKI2 254 aa15.6■□□□□ 0.09
CASC4-203ENST00000429162 PHOX2AO14813 284 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 S100A8P05109 93 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 TRGC1P0CF51 173 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 NDUFA6P56556 154 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 SGMS2Q8NHU3 365 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 BBC3Q96PG8 261 aaPredicted RBP15.59■□□□□ 0.09
CASC4-203ENST00000429162 SLC25A39Q9BZJ4 359 aaPredicted RBP15.59■□□□□ 0.09
CASC4-203ENST00000429162 TMEM14CQ9P0S9 112 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 DOPEY1Q5JWR5 2465 aa15.59■□□□□ 0.09
CASC4-203ENST00000429162 GNG7O60262 68 aa15.58■□□□□ 0.09
CASC4-203ENST00000429162 NBEAP1P0C6P0 100 aa15.58■□□□□ 0.09
CASC4-203ENST00000429162 MYCNOSP40205 109 aa15.58■□□□□ 0.09
CASC4-203ENST00000429162 BLNKQ8WV28 456 aa15.58■□□□□ 0.09
CASC4-203ENST00000429162 MRPL27Q9P0M9 148 aaKnown RBP15.58■□□□□ 0.09
CASC4-203ENST00000429162 TACC2O95359 2948 aa15.58■□□□□ 0.09
CASC4-203ENST00000429162 IGHV1-69DA0A0B4J2H0 117 aa15.58■□□□□ 0.08
CASC4-203ENST00000429162 SCGB2A1O75556 95 aa15.58■□□□□ 0.08
CASC4-203ENST00000429162 IGHV1-69P01742 117 aa15.58■□□□□ 0.08
CASC4-203ENST00000429162 ERVFC1-1P60608 527 aa15.58■□□□□ 0.08
CASC4-203ENST00000429162 YPEL3P61236 119 aaPredicted RBP15.58■□□□□ 0.08
CASC4-203ENST00000429162 IL36BQ9NZH7 164 aa15.58■□□□□ 0.08
CASC4-203ENST00000429162 TRAV9-1A0A075B6T8 112 aa15.57■□□□□ 0.08
CASC4-203ENST00000429162 IGHV4-30-2A0A087WSY4 118 aa15.57■□□□□ 0.08
CASC4-203ENST00000429162 EGR2P11161 476 aaPredicted RBP15.57■□□□□ 0.08
CASC4-203ENST00000429162 HIST1H1BP16401 226 aaKnown RBP15.57■□□□□ 0.08
CASC4-203ENST00000429162 HOXA5P20719 270 aa15.57■□□□□ 0.08
CASC4-203ENST00000429162 RANP62826 216 aaKnown RBP15.57■□□□□ 0.08
CASC4-203ENST00000429162 S100A7AQ86SG5 101 aa15.57■□□□□ 0.08
CASC4-203ENST00000429162 C21orf62Q9NYP8 219 aa15.57■□□□□ 0.08
CASC4-203ENST00000429162 A0A0U1RQK1 487 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 GCGP01275 180 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 Q56UQ5 140 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 LEMD1Q68G75 181 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 FAM110DQ8TAY7 271 aaPredicted RBP15.56■□□□□ 0.08
CASC4-203ENST00000429162 RNF125Q96EQ8 232 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 HSPB9Q9BQS6 159 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 OSTCQ9NRP0 149 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 SLC25A5P05141 298 aaKnown RBP15.56■□□□□ 0.08
CASC4-203ENST00000429162 DSCR9P59020 149 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 ZNF600Q6ZNG1 722 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 ZNF843Q8N446 348 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 TMEM190Q8WZ59 177 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 TMEM68Q96MH6 324 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 SHANK2-AS3Q9BTD1 123 aa15.56■□□□□ 0.08
CASC4-203ENST00000429162 USP24Q9UPU5 2620 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 ZNF320A2RRD8 509 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 H3BRN7 92 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 IGLV2-8P01709 118 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 OR5I1Q13606 314 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 ACTL10Q5JWF8 245 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 ZNF491Q8N8L2 437 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 EPDR1Q9UM22 224 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 TRAV40A0A0B4J280 105 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 WI2-2373I1.2A0A1W2PRP0 233 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 PGPA6NDG6 321 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 OR2J3O76001 311 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 NDUFB8O95169 186 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 IL4P05112 153 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 RPEL1Q2QD12 228 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 C5orf17Q8NAS9 161 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 S4R3C0 116 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 V9GYV3 84 aa15.55■□□□□ 0.08
CASC4-203ENST00000429162 SLC17A3O00476 420 aa15.54■□□□□ 0.08
CASC4-203ENST00000429162 ISLRO14498 428 aa15.54■□□□□ 0.08
CASC4-203ENST00000429162 SNRPCP09234 159 aaKnown RBP15.54■□□□□ 0.08
CASC4-203ENST00000429162 HIST1H1EP10412 219 aaKnown RBP15.54■□□□□ 0.08
CASC4-203ENST00000429162 MGST1P10620 155 aaKnown RBP15.54■□□□□ 0.08
CASC4-203ENST00000429162 COX6B1P14854 86 aa15.54■□□□□ 0.08
CASC4-203ENST00000429162 PAX1P15863 534 aa15.54■□□□□ 0.08
CASC4-203ENST00000429162 CDX1P47902 265 aaPredicted RBP15.54■□□□□ 0.08
CASC4-203ENST00000429162 RNF24Q9Y225 148 aa15.54■□□□□ 0.08
CASC4-203ENST00000429162 F8W735 103 aaPredicted RBP15.53■□□□□ 0.08
CASC4-203ENST00000429162 ATP6V0E1O15342 81 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms