RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
TRIM39-207ENST00000428404 C18orf65Q6ZTR6 163 aa9.62□□□□□ -0.87
TRIM39-207ENST00000428404 C4orf3Q8WVX3 66 aa9.62□□□□□ -0.87
TRIM39-207ENST00000428404 CITED2Q99967 270 aaPredicted RBP9.62□□□□□ -0.87
TRIM39-207ENST00000428404 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 ADARB2-AS1A8MUL3 147 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 UMAD1C9J7I0 102 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 ARL3P36405 182 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 B2MP61769 119 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 ZNF616Q08AN1 781 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 FFAR4Q5NUL3 377 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 PATE2Q6UY27 113 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 Q8WTZ3 238 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 OR5B12Q96R08 314 aa9.61□□□□□ -0.87
TRIM39-207ENST00000428404 TSSC4Q9Y5U2 329 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-207ENST00000428404 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
TRIM39-207ENST00000428404 IFNA7P01567 189 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 MBP02144 154 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
TRIM39-207ENST00000428404 SULT1A2P50226 295 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 RELQ04864 619 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-207ENST00000428404 GCSAMLQ5JQS6 135 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 TOMM20LQ6UXN7 152 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 OR51G1Q8NGK1 321 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 VSIRQ9H7M9 311 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 RPRMQ9NS64 109 aa9.6□□□□□ -0.87
TRIM39-207ENST00000428404 COL6A5A8TX70 2615 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 IGHV4OR15-8A0A075B7B6 117 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 A0A087WW49 117 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 NDUFA4O00483 81 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 RGS13O14921 159 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 M6PRP20645 277 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 RAB5CP51148 216 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 ELLP55199 621 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-207ENST00000428404 RAB2AP61019 212 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 ACOT6Q3I5F7 207 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-207ENST00000428404 TMEM41BQ5BJD5 291 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 Q6ZRG5 221 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 ZNF767PQ75MW2 155 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 RPP25LQ8N5L8 163 aaKnown RBP9.59□□□□□ -0.87
TRIM39-207ENST00000428404 TMEM37Q8WXS4 190 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 C19orf24Q9BVV8 132 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 DNAJC4Q9NNZ3 241 aa9.59□□□□□ -0.87
TRIM39-207ENST00000428404 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
TRIM39-207ENST00000428404 PUS1Q9Y606 427 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM39-207ENST00000428404 ELOA3CA0A087WX78 387 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-207ENST00000428404 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 SEC14L6B5MCN3 397 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 HYPMO75409 117 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 IL4P05112 153 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 FHITP49789 147 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 AKR1C8PQ5T2L2 129 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 DPPA3Q6W0C5 159 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 NDUFA11Q86Y39 141 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 LURAP1LQ8IV03 231 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 KLHL30-AS1Q8NEE0 82 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 OR10G4Q8NGN3 311 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 OR10G9Q8NGN4 311 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 OR10G7Q8NGN6 311 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 GATAD1Q8WUU5 269 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 RNF125Q96EQ8 232 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
TRIM39-207ENST00000428404 CITED1Q99966 193 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 UBQLN2Q9UHD9 624 aa9.58□□□□□ -0.88
TRIM39-207ENST00000428404 OR5G3P0C626 314 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 ORM2P19652 201 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 LYZP61626 148 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 FHL3Q13643 280 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 KLF5Q13887 457 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-207ENST00000428404 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-207ENST00000428404 ZNF726P1Q15940 193 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 DEFB136Q30KP8 78 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 KHDC1LQ5JSQ8 128 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 UNQ9165/PRO28630Q6UXU0 137 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 C8orf86Q6ZUL3 223 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 OR11H1Q8NG94 326 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 OR1L4Q8NGR5 311 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 OR1N2Q8NGR9 330 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 RNF141Q8WVD5 230 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 RAX2Q96IS3 184 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 PFDN5Q99471 154 aa9.57□□□□□ -0.88
TRIM39-207ENST00000428404 NUDT19A8MXV4 375 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 LINC01619G3V211 115 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 LGALS9O00182 355 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 COX7A2P2O60397 106 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 ZP3P21754 424 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-207ENST00000428404 RPEL1Q2QD12 228 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 FAM106AQ4KMX7 169 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 MBD3L1Q8WWY6 194 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 TMEM190Q8WZ59 177 aa9.56□□□□□ -0.88
TRIM39-207ENST00000428404 TMEM158Q8WZ71 300 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms