RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 MED6O75586 246 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 NXPH3O95157 252 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 S100A5P33763 92 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 NANOS2P60321 138 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 RPP30P78346 268 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 TMEM128Q5BJH2 165 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 TOMM5Q8N4H5 51 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 SLC25A21Q9BQT8 299 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-202ENST00000428361 ZNF705EA8MWA4 302 aaPredicted RBP11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 PSG1P11464 419 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 SLC25A6P12236 298 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 S100A7P31151 101 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 Q8NAQ8 132 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 CIB3Q96Q77 187 aaPredicted RBP11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 RAB40CQ96S21 281 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 SOSTQ9BQB4 213 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 RBKSQ9H477 322 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 TBC1D24Q9ULP9 559 aa11.27□□□□□ -0.61
CTDSP1-202ENST00000428361 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 CFDP00746 253 aaPredicted RBP11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 ID1P41134 155 aa11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 SUPT4H1P63272 117 aaKnown RBP11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 PYDC2Q56P42 97 aa11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 TMED4Q7Z7H5 227 aa11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 TMED3Q9Y3Q3 217 aa11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 HYDINQ4G0P3 5121 aa11.26□□□□□ -0.61
CTDSP1-202ENST00000428361 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 SNRPGP15A8MWD9 76 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 VAMP1P23763 118 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 C1orf194Q5T5A4 169 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 PBDC1Q9BVG4 233 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 PRR13Q9NZ81 148 aa11.25□□□□□ -0.61
CTDSP1-202ENST00000428361 EPPK1P58107 5090 aaKnown RBP11.24□□□□□ -0.61
CTDSP1-202ENST00000428361 DEFB4AO15263 64 aa11.24□□□□□ -0.61
CTDSP1-202ENST00000428361 C4BPBP20851 252 aa11.24□□□□□ -0.61
CTDSP1-202ENST00000428361 PPP1R14BQ96C90 147 aa11.24□□□□□ -0.61
CTDSP1-202ENST00000428361 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 CCDC160A6NGH7 325 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 UBE2MP61081 183 aaKnown RBP11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 GAMTQ14353 236 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 GGNBP1Q5YKI7 109 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 COQ8AQ8NI60 647 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 TRIM63Q969Q1 353 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 TRGV9Q99603 122 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 AGRNO00468 2067 aa11.23□□□□□ -0.61
CTDSP1-202ENST00000428361 IGLL5B9A064 214 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 H3BMM0 161 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 PITX3O75364 302 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 PSMB3P49720 205 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 MEOX2P50222 304 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 LYZP61626 148 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 PAIP2BQ9ULR5 123 aaKnown RBP11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 SLC45A2Q9UMX9 530 aa11.22□□□□□ -0.61
CTDSP1-202ENST00000428361 TMEM189A5PLL7 270 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 SFT2D2O95562 160 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 INPP1P49441 399 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 OR8I2Q8N0Y5 310 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 X6R8D5 127 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 BIRC6Q9NR09 4857 aa11.21□□□□□ -0.61
CTDSP1-202ENST00000428361 TEX48A0A1B0GUV7 120 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 ISLRO14498 428 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 SYNGR2O43760 224 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 IAPPP10997 89 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 GALR1P47211 349 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 ZNF90Q03938 601 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 CLUHP3Q96NS8 147 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 NEU1Q99519 415 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 V9GYH0 126 aa11.2□□□□□ -0.62
CTDSP1-202ENST00000428361 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 NAP1L6A6NFF2 107 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 EBLN2Q6P2I7 272 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 BPIFCQ8NFQ6 507 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 LINC00052Q96N35 136 aa11.19□□□□□ -0.62
CTDSP1-202ENST00000428361 GPR82Q96P67 336 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms