RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 VAMP1P23763 118 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 S100A5P33763 92 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 GPX4P36969 197 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 GGNBP1Q5YKI7 109 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 GSG1LQ6UXU4 331 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 RNF125Q96EQ8 232 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 RABAC1Q9UI14 185 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 TMED3Q9Y3Q3 217 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 X6R8D5 127 aa11.6□□□□□ -0.55
HLA-DQB2-230ENST00000427449 PLA2G10O15496 165 aa11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ATP5IP56385 69 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 UBE2MP61081 183 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 PAFAH1B2P68402 229 aa11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 TMEM182Q6ZP80 229 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 OR4D5Q8NGN0 318 aa11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 Q8WTZ3 238 aa11.59□□□□□ -0.55
HLA-DQB2-230ENST00000427449 ZNF705EA8MWA4 302 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 DNASE2O00115 360 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RD3LP0DJH9 198 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 IL7P13232 177 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 PAX9P55771 341 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 DEFB1P60022 68 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ID3Q02535 119 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 DHRS2Q13268 280 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SPANXN2Q5MJ10 180 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 CEMP1Q6PRD7 247 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 TRGV9Q99603 122 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 WDR12Q9GZL7 423 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SYNGR2O43760 224 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 HOXB5P09067 269 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 EIF2B2P49770 351 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 GDF5OSQ5U4N7 250 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 OR8G2PQ6IF36 304 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SIGLEC15Q6ZMC9 328 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 NOXA1Q86UR1 476 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RARRES2Q99969 163 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 NRN1Q9NPD7 142 aa11.57□□□□□ -0.56
HLA-DQB2-230ENST00000427449 NUPR2A6NF83 97 aa11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 HELTA6NFD8 242 aa11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 CCNKO75909 580 aa11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 IFNA4P05014 189 aa11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RPL11P62913 178 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RAB40CQ96S21 281 aa11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SEPSECSQ9HD40 501 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB2-230ENST00000427449 NAP1L6A6NFF2 107 aa11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 H3BP45 60 aa11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 DEFB4AO15263 64 aa11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SCGB2A1O75556 95 aa11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 OR4E1P0C645 316 aa11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB2-230ENST00000427449 CXorf65A6NEN9 183 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 H3BMM0 161 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 WRBO00258 174 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 JTBO76095 146 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SPP1P10451 314 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 POLR2GP62487 172 aaKnown RBP eCLIP11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ACTL10Q5JWF8 245 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ACOT7LQ6ZUV0 252 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 STHQ8IWL8 128 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 PHLDA1Q8WV24 401 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 SLC35E1Q96K37 410 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 C11orf1Q9H5F2 150 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 IGHV4-28A0A0C4DH34 117 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ZFP92A6NM28 416 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 A8MTW9 85 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 GATA2P23769 480 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 OR2F1Q13607 317 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 MORN3Q6PF18 240 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
HLA-DQB2-230ENST00000427449 LYZP61626 148 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 C1orf194Q5T5A4 169 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 TMEM14EPQ6UXP3 125 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 MITD1Q8WV92 249 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 NARS2Q96I59 477 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 C20orf173Q96LM9 149 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 CIB3Q96Q77 187 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 C7orf50Q9BRJ6 194 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 PBDC1Q9BVG4 233 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 SLC25A32Q9H2D1 315 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 CLEC5AQ9NY25 188 aa11.52□□□□□ -0.57
HLA-DQB2-230ENST00000427449 CELA1Q9UNI1 258 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms