RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 H3BMM0 161 aa7.22□□□□□ -1.25
GACAT3-201ENST00000426539 TOMM40O96008 361 aa7.22□□□□□ -1.25
GACAT3-201ENST00000426539 NPY1RP25929 384 aa7.22□□□□□ -1.25
GACAT3-201ENST00000426539 ALDH3B2P48448 385 aa7.22□□□□□ -1.25
GACAT3-201ENST00000426539 DEFB1P60022 68 aa7.22□□□□□ -1.25
GACAT3-201ENST00000426539 MRPS10P82664 201 aaKnown RBP7.22□□□□□ -1.25
GACAT3-201ENST00000426539 OR51S1Q8NGJ8 323 aa7.22□□□□□ -1.25
GACAT3-201ENST00000426539 IGKV1D-37A0A075B6S9 117 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 CTDSPLO15194 276 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 RGS5O15539 181 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 AKAIN1P0CW23 69 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 RD3LP0DJH9 198 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 PSG1P11464 419 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 EIF2B2P49770 351 aaKnown RBP7.21□□□□□ -1.26
GACAT3-201ENST00000426539 AP2S1P53680 142 aaPredicted RBP7.21□□□□□ -1.26
GACAT3-201ENST00000426539 SUPT4H1P63272 117 aaKnown RBP7.21□□□□□ -1.26
GACAT3-201ENST00000426539 GDF5OSQ5U4N7 250 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 ETFRF1Q6IPR1 90 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 GSG1LQ6UXU4 331 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 SIGLEC15Q6ZMC9 328 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 OR51G1Q8NGK1 321 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 IL22RA2Q969J5 263 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 ACY3Q96HD9 319 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 RNF126Q9BV68 326 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 SEPSECSQ9HD40 501 aaKnown RBP7.21□□□□□ -1.26
GACAT3-201ENST00000426539 NRN1Q9NPD7 142 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 XCL2Q9UBD3 114 aa7.21□□□□□ -1.26
GACAT3-201ENST00000426539 DEFB131BA0A096LNP1 70 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 ANKRD20A5PA0PJZ0 165 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 AMBPP02760 352 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 SULT1A3P0DMM9 295 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 SULT1A4P0DMN0 295 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 HLA-DRB4P13762 266 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 SNRPD3P62318 126 aaKnown RBP7.2□□□□□ -1.26
GACAT3-201ENST00000426539 ZNF705AQ6ZN79 300 aaPredicted RBP7.2□□□□□ -1.26
GACAT3-201ENST00000426539 LYZL2Q7Z4W2 148 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 CLVS1Q8IUQ0 354 aaPredicted RBP7.2□□□□□ -1.26
GACAT3-201ENST00000426539 PRRT1Q99946 306 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 WDR12Q9GZL7 423 aaKnown RBP7.2□□□□□ -1.26
GACAT3-201ENST00000426539 RBKSQ9H477 322 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 HSPB7Q9UBY9 170 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 HLA-DRB4X5D2U9 266 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
GACAT3-201ENST00000426539 A0A0B4J2A0 478 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 A0A1B0GVY2 172 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 ZNF705FA8MVS1 300 aaPredicted RBP7.19□□□□□ -1.26
GACAT3-201ENST00000426539 SOCS3O14543 225 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 GSTZ1O43708 216 aaPredicted RBP7.19□□□□□ -1.26
GACAT3-201ENST00000426539 IFNA10P01566 189 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 ZNF705DP0CH99 300 aaPredicted RBP7.19□□□□□ -1.26
GACAT3-201ENST00000426539 ZNF705BP0CI00 300 aaPredicted RBP7.19□□□□□ -1.26
GACAT3-201ENST00000426539 NKX2-1P43699 371 aaPredicted RBP7.19□□□□□ -1.26
GACAT3-201ENST00000426539 CCR6P51684 374 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 FXYD7P58549 80 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 ZNF90Q03938 601 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 KLF9Q13886 244 aaPredicted RBP7.19□□□□□ -1.26
GACAT3-201ENST00000426539 IL18Q14116 193 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 GAMTQ14353 236 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 SMCO1Q147U7 214 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 GPR141Q7Z602 305 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 NOXA1Q86UR1 476 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 LGI3Q8N145 548 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 DYNC2LI1Q8TCX1 351 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 DTD1Q8TEA8 209 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 RNF125Q96EQ8 232 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 DIRAS2Q96HU8 199 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 SOSTQ9BQB4 213 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 SHPKQ9UHJ6 478 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 U3KQ87 197 aa7.19□□□□□ -1.26
GACAT3-201ENST00000426539 IGKV3-20P01619 116 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 VAMP1P23763 118 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 NUTF2P61970 127 aaKnown RBP7.18□□□□□ -1.26
GACAT3-201ENST00000426539 OR8G2PQ6IF36 304 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 ZNF709Q8N972 641 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 NEU1Q99519 415 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 PBDC1Q9BVG4 233 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 C1QTNF4Q9BXJ3 329 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 MRPS26Q9BYN8 205 aaKnown RBP7.18□□□□□ -1.26
GACAT3-201ENST00000426539 SAV1Q9H4B6 383 aaPredicted RBP7.18□□□□□ -1.26
GACAT3-201ENST00000426539 CCDC59Q9P031 241 aaKnown RBP7.18□□□□□ -1.26
GACAT3-201ENST00000426539 CACFD1Q9UGQ2 172 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 KCNIP3Q9Y2W7 256 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
GACAT3-201ENST00000426539 IGKV1OR2-108A0A075B7D4 117 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 PITX3O75364 302 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 AKR1C4P17516 323 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 GPX4P36969 197 aaPredicted RBP7.17□□□□□ -1.26
GACAT3-201ENST00000426539 CDPF1Q6NVV7 123 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 POM121L12Q8N7R1 296 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 C17orf77Q96MU5 243 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 LINC00052Q96N35 136 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 SCP2D1Q9UJQ7 156 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
GACAT3-201ENST00000426539 DNAH2Q9P225 4427 aa7.16□□□□□ -1.26
GACAT3-201ENST00000426539 ZFP92A6NM28 416 aa7.16□□□□□ -1.26
GACAT3-201ENST00000426539 F6UB75 175 aa7.16□□□□□ -1.26
GACAT3-201ENST00000426539 RTL8CO15255 209 aa7.16□□□□□ -1.26
GACAT3-201ENST00000426539 TNFSF8P32971 234 aa7.16□□□□□ -1.26
GACAT3-201ENST00000426539 PSMB3P49720 205 aa7.16□□□□□ -1.26
GACAT3-201ENST00000426539 EMP1P54849 157 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms