RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 U3KQE9 123 aa12.93□□□□□ -0.34
SLC6A1-202ENST00000425938 CSMD3Q7Z407 3707 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 PLA2G10O15496 165 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 SPRY2O43597 315 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 NUP62P37198 522 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 DEFB131AP59861 70 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 ZNF124Q15973 351 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 SPANXN5Q5MJ07 72 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 C16orf54Q6UWD8 224 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 LINC00299Q6ZSB3 139 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 RNF125Q96EQ8 232 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 CCDC32Q9BV29 185 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 C20orf85Q9H1P6 137 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 RYR2Q92736 4967 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 AGRNO00468 2067 aa12.92□□□□□ -0.34
SLC6A1-202ENST00000425938 K7EQG2 157 aa12.91□□□□□ -0.34
SLC6A1-202ENST00000425938 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
SLC6A1-202ENST00000425938 PBDC1Q9BVG4 233 aa12.91□□□□□ -0.34
SLC6A1-202ENST00000425938 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
SLC6A1-202ENST00000425938 STRAPQ9Y3F4 350 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-202ENST00000425938 MPTX1A8MV57 137 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 ID3Q02535 119 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 LEMD1Q68G75 181 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 OR8G2PQ6IF36 304 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 FAM24BQ8N5W8 94 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 MITD1Q8WV92 249 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 S100ZQ8WXG8 99 aa12.9□□□□□ -0.34
SLC6A1-202ENST00000425938 TENM2Q9NT68 2774 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 IGKV1D-37A0A075B6S9 117 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 SNRPGP15A8MWD9 76 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 H3BP45 60 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 BUB3O43684 328 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 TCRBP04435 133 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 ZNF90Q03938 601 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 OR4D5Q8NGN0 318 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 RNF183Q96D59 192 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 TRGV9Q99603 122 aa12.89□□□□□ -0.35
SLC6A1-202ENST00000425938 SACSQ9NZJ4 4579 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 SSSCA1O60232 199 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 ZNF688P0C7X2 276 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 LYZP61626 148 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 OR2F1Q13607 317 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 IAH1Q2TAA2 248 aaPredicted RBP12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 SIGLEC15Q6ZMC9 328 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 STHQ8IWL8 128 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 THAP8Q8NA92 274 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 DCANP1Q8TF63 244 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 PSENENQ9NZ42 101 aa12.88□□□□□ -0.35
SLC6A1-202ENST00000425938 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 LCE6AA0A183 80 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 AKR1C1Q04828 323 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 NUDT15Q9NV35 164 aa12.87□□□□□ -0.35
SLC6A1-202ENST00000425938 PRSS46E5RG02 174 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 SNRPD3P62318 126 aaKnown RBP12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 MZT2BQ6NZ67 158 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 ACOT7LQ6ZUV0 252 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 ZBTB8BQ8NAP8 495 aaPredicted RBP12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 GATAD1Q8WUU5 269 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 SMIM8Q96KF7 97 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 LYSTQ99698 3801 aa12.86□□□□□ -0.35
SLC6A1-202ENST00000425938 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 A0A0J9YWU9 116 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 FAM240BA0A1B0GVZ2 78 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 A6NHS1 94 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 ZNF846Q147U1 533 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 C1orf194Q5T5A4 169 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 SEPSECSQ9HD40 501 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 FBXL17Q9UF56 701 aa12.85□□□□□ -0.35
SLC6A1-202ENST00000425938 SMCO3A2RU48 225 aa12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 PSMG4Q5JS54 123 aa12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 TMEM217Q8N7C4 229 aa12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 WDR12Q9GZL7 423 aaKnown RBP12.84□□□□□ -0.35
SLC6A1-202ENST00000425938 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
SLC6A1-202ENST00000425938 S100A7P31151 101 aa12.83□□□□□ -0.36
SLC6A1-202ENST00000425938 TAS2R30P59541 319 aa12.83□□□□□ -0.36
SLC6A1-202ENST00000425938 ACTL10Q5JWF8 245 aa12.83□□□□□ -0.36
SLC6A1-202ENST00000425938 TMEM144Q7Z5S9 345 aa12.83□□□□□ -0.36
SLC6A1-202ENST00000425938 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
SLC6A1-202ENST00000425938 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 CCSO14618 274 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 TSC22D2O75157 780 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 SPP1P10451 314 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 ASAH1Q13510 395 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 TMEM41BQ5BJD5 291 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 MORN3Q6PF18 240 aaPredicted RBP12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 TMEM14EPQ6UXP3 125 aa12.82□□□□□ -0.36
SLC6A1-202ENST00000425938 TRPT1Q86TN4 253 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms