RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 OVOL2Q9BRP0 275 aa13.66□□□□□ -0.22
MSH5-207ENST00000425703 PFDN2Q9UHV9 154 aa13.66□□□□□ -0.22
MSH5-207ENST00000425703 MPTX1A8MV57 137 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 PRSS46E5RG02 174 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 NKX2-1P43699 371 aaPredicted RBP13.65□□□□□ -0.22
MSH5-207ENST00000425703 OR8G2PQ6IF36 304 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 WFDC3Q8IUB2 231 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 IL17DQ8TAD2 202 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 GLMPQ8WWB7 406 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 TRGV9Q99603 122 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
MSH5-207ENST00000425703 STRAPQ9Y3F4 350 aaKnown RBP13.65□□□□□ -0.22
MSH5-207ENST00000425703 IGKV1D-37A0A075B6S9 117 aa13.64□□□□□ -0.23
MSH5-207ENST00000425703 K7EQG2 157 aa13.64□□□□□ -0.23
MSH5-207ENST00000425703 BUB3O43684 328 aa13.64□□□□□ -0.23
MSH5-207ENST00000425703 THAP8Q8NA92 274 aa13.64□□□□□ -0.23
MSH5-207ENST00000425703 DCANP1Q8TF63 244 aa13.64□□□□□ -0.23
MSH5-207ENST00000425703 PAIP2BQ9ULR5 123 aaKnown RBP13.64□□□□□ -0.23
MSH5-207ENST00000425703 CFDP00746 253 aaPredicted RBP13.63□□□□□ -0.23
MSH5-207ENST00000425703 POLR2GP62487 172 aaKnown RBP eCLIP13.63□□□□□ -0.23
MSH5-207ENST00000425703 ZNF90Q03938 601 aa13.63□□□□□ -0.23
MSH5-207ENST00000425703 SPANXN5Q5MJ07 72 aa13.63□□□□□ -0.23
MSH5-207ENST00000425703 STXBP6Q8NFX7 210 aa13.63□□□□□ -0.23
MSH5-207ENST00000425703 SNRPGP15A8MWD9 76 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 SPRY2O43597 315 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 RPL35AP18077 110 aaKnown RBP13.62□□□□□ -0.23
MSH5-207ENST00000425703 DEFB131AP59861 70 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 IAH1Q2TAA2 248 aaPredicted RBP13.62□□□□□ -0.23
MSH5-207ENST00000425703 RNF183Q96D59 192 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 SMIM8Q96KF7 97 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 CSTL1Q9H114 145 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 SEPSECSQ9HD40 501 aaKnown RBP13.62□□□□□ -0.23
MSH5-207ENST00000425703 NUDT15Q9NV35 164 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 PTTG2Q9NZH5 202 aa13.62□□□□□ -0.23
MSH5-207ENST00000425703 IGKV1OR2-108A0A075B7D4 117 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 TAS2R30P59541 319 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 ASAH1Q13510 395 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 ZNF124Q15973 351 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 MZT2BQ6NZ67 158 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 FAM24BQ8N5W8 94 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 RAB40CQ96S21 281 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 WDR12Q9GZL7 423 aaKnown RBP13.61□□□□□ -0.23
MSH5-207ENST00000425703 PSENENQ9NZ42 101 aa13.61□□□□□ -0.23
MSH5-207ENST00000425703 TRAV6A0A075B6T7 132 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 H3BP45 60 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 SSSCA1O60232 199 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 DEFB135Q30KP9 77 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 C1orf194Q5T5A4 169 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 SIGLEC15Q6ZMC9 328 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 ZBTB8BQ8NAP8 495 aaPredicted RBP13.6□□□□□ -0.23
MSH5-207ENST00000425703 ZNF431Q8TF32 576 aaPredicted RBP13.6□□□□□ -0.23
MSH5-207ENST00000425703 PBDC1Q9BVG4 233 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 NRN1Q9NPD7 142 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
MSH5-207ENST00000425703 FAM240BA0A1B0GVZ2 78 aa13.59□□□□□ -0.23
MSH5-207ENST00000425703 H2AFB2P0C5Z0 115 aa13.59□□□□□ -0.23
MSH5-207ENST00000425703 GATAD1Q8WUU5 269 aa13.59□□□□□ -0.23
MSH5-207ENST00000425703 FBXL17Q9UF56 701 aa13.59□□□□□ -0.23
MSH5-207ENST00000425703 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
MSH5-207ENST00000425703 CSMD3Q7Z407 3707 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 TSC22D2O75157 780 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 PAX9P55771 341 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 LYZP61626 148 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 ZNF846Q147U1 533 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 LEMD1Q68G75 181 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 TMEM14EPQ6UXP3 125 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 ACOT7LQ6ZUV0 252 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 TMEM144Q7Z5S9 345 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 GSKIPQ9P0R6 139 aa13.58□□□□□ -0.24
MSH5-207ENST00000425703 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 FNDC10F2Z333 226 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 UPK1BO75841 260 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 ZNF688P0C7X2 276 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 ATF4P18848 351 aaPredicted RBP13.57□□□□□ -0.24
MSH5-207ENST00000425703 SNRPD3P62318 126 aaKnown RBP13.57□□□□□ -0.24
MSH5-207ENST00000425703 AKR1C1Q04828 323 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 ZFAND6Q6FIF0 208 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 STHQ8IWL8 128 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 C12orf45Q8N5I9 185 aaPredicted RBP13.57□□□□□ -0.24
MSH5-207ENST00000425703 BATF3Q9NR55 127 aa13.57□□□□□ -0.24
MSH5-207ENST00000425703 RCL1Q9Y2P8 373 aaKnown RBP13.57□□□□□ -0.24
MSH5-207ENST00000425703 SCGB1D2O95969 90 aa13.56□□□□□ -0.24
MSH5-207ENST00000425703 MBPP02686 304 aaPredicted RBP13.56□□□□□ -0.24
MSH5-207ENST00000425703 DLK1P80370 383 aa13.56□□□□□ -0.24
MSH5-207ENST00000425703 OR2F1Q13607 317 aa13.56□□□□□ -0.24
MSH5-207ENST00000425703 BPIFCQ8NFQ6 507 aa13.56□□□□□ -0.24
MSH5-207ENST00000425703 SEC22CQ9BRL7 303 aa13.56□□□□□ -0.24
MSH5-207ENST00000425703 STARD9Q9P2P6 4700 aa13.55□□□□□ -0.24
MSH5-207ENST00000425703 IL5P05113 134 aa13.55□□□□□ -0.24
MSH5-207ENST00000425703 S100A7P31151 101 aa13.55□□□□□ -0.24
MSH5-207ENST00000425703 TMEM41BQ5BJD5 291 aa13.55□□□□□ -0.24
MSH5-207ENST00000425703 TRPT1Q86TN4 253 aaKnown RBP13.55□□□□□ -0.24
MSH5-207ENST00000425703 OR10P1Q8NGE3 313 aa13.55□□□□□ -0.24
MSH5-207ENST00000425703 C7orf66A4D0T2 115 aa13.54□□□□□ -0.24
MSH5-207ENST00000425703 SPP1P10451 314 aa13.54□□□□□ -0.24
MSH5-207ENST00000425703 PSMG4Q5JS54 123 aa13.54□□□□□ -0.24
MSH5-207ENST00000425703 MORN3Q6PF18 240 aaPredicted RBP13.54□□□□□ -0.24
MSH5-207ENST00000425703 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms