RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 RNF183Q96D59 192 aa13.12□□□□□ -0.31
SBDSP1-202ENST00000423945 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
SBDSP1-202ENST00000423945 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
SBDSP1-202ENST00000423945 TP53TG1Q9Y2A0 90 aa13.12□□□□□ -0.31
SBDSP1-202ENST00000423945 LYRM1O43325 122 aa13.11□□□□□ -0.31
SBDSP1-202ENST00000423945 SPRY2O43597 315 aa13.11□□□□□ -0.31
SBDSP1-202ENST00000423945 LEMD1Q68G75 181 aa13.11□□□□□ -0.31
SBDSP1-202ENST00000423945 STPG3Q8N7X2 389 aa13.11□□□□□ -0.31
SBDSP1-202ENST00000423945 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
SBDSP1-202ENST00000423945 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
SBDSP1-202ENST00000423945 H3BP45 60 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 BUB3O43684 328 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 RAB11AP62491 216 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 EWSR1Q01844 656 aaKnown RBP eCLIP13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 THAP8Q8NA92 274 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 C20orf85Q9H1P6 137 aa13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
SBDSP1-202ENST00000423945 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 A6NHS1 94 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 ZFP92A6NM28 416 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 MITD1Q8WV92 249 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
SBDSP1-202ENST00000423945 TCRBP04435 133 aa13.08□□□□□ -0.32
SBDSP1-202ENST00000423945 ZNF688P0C7X2 276 aa13.08□□□□□ -0.32
SBDSP1-202ENST00000423945 NKX2-1P43699 371 aaPredicted RBP13.08□□□□□ -0.32
SBDSP1-202ENST00000423945 PAX9P55771 341 aa13.08□□□□□ -0.32
SBDSP1-202ENST00000423945 TRGV9Q99603 122 aa13.08□□□□□ -0.32
SBDSP1-202ENST00000423945 CCDC32Q9BV29 185 aa13.08□□□□□ -0.32
SBDSP1-202ENST00000423945 A0A0J9YWU9 116 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 HELTA6NFD8 242 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 PMS2P5A8MQ11 134 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 OR2F1Q13607 317 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 LINC00299Q6ZSB3 139 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
SBDSP1-202ENST00000423945 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 TRAV6A0A075B6T7 132 aa13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 CCNKO75909 580 aa13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 IFNA21P01568 189 aa13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 RPP30P78346 268 aaKnown RBP13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 OR8G2PQ6IF36 304 aa13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 SIGLEC15Q6ZMC9 328 aa13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 TMEM182Q6ZP80 229 aaPredicted RBP13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 TRPT1Q86TN4 253 aaKnown RBP13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 ZBTB8BQ8NAP8 495 aaPredicted RBP13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 STRAPQ9Y3F4 350 aaKnown RBP13.06□□□□□ -0.32
SBDSP1-202ENST00000423945 KNCNA6PVL3 124 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 SSSCA1O60232 199 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 GIG44P09565 113 aaPredicted RBP13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 LYZP61626 148 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 IAH1Q2TAA2 248 aaPredicted RBP13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 ACOT7LQ6ZUV0 252 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 IL17DQ8TAD2 202 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 SEC22CQ9BRL7 303 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 NUDT15Q9NV35 164 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 PSENENQ9NZ42 101 aa13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
SBDSP1-202ENST00000423945 LCE6AA0A183 80 aa13.04□□□□□ -0.32
SBDSP1-202ENST00000423945 CCSO14618 274 aa13.04□□□□□ -0.32
SBDSP1-202ENST00000423945 AP2S1P53680 142 aaPredicted RBP13.04□□□□□ -0.32
SBDSP1-202ENST00000423945 GSG1LQ6UXU4 331 aa13.04□□□□□ -0.32
SBDSP1-202ENST00000423945 NRN1Q9NPD7 142 aa13.04□□□□□ -0.32
SBDSP1-202ENST00000423945 HYDINQ4G0P3 5121 aa13.04□□□□□ -0.32
SBDSP1-202ENST00000423945 ALMS1Q8TCU4 4167 aa13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 SNRPGP15A8MWD9 76 aa13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 CA1P00915 261 aaPredicted RBP13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 GATA2P23769 480 aaPredicted RBP13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 TMEM14EPQ6UXP3 125 aa13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 GATAD1Q8WUU5 269 aa13.03□□□□□ -0.32
SBDSP1-202ENST00000423945 MBPP02686 304 aaPredicted RBP13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 FABP1P07148 127 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 C4BPBP20851 252 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 IFITM3Q01628 133 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 PSMG4Q5JS54 123 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 STHQ8IWL8 128 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 S100ZQ8WXG8 99 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 WDR12Q9GZL7 423 aaKnown RBP13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 GSKIPQ9P0R6 139 aa13.02□□□□□ -0.33
SBDSP1-202ENST00000423945 H2AFB2P0C5Z0 115 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 METTL15P1P0C7V9 234 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 AKR1C1Q04828 323 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 ASAH1Q13510 395 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
SBDSP1-202ENST00000423945 C7orf66A4D0T2 115 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms