RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MAGT1Q9H0U3 335 aa11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 A8MTW9 85 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 NUDT3O95989 172 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 PSG1P11464 419 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 PIGPP57054 158 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 OR51G1Q8NGK1 321 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 Q9H8V8 135 aa11.68□□□□□ -0.54
CHCHD3-202ENST00000423635 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 A0A0J9YX75 114 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 SAMD12Q8N8I0 201 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 COQ8AQ8NI60 647 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 TMEM170AQ8WVE7 144 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
CHCHD3-202ENST00000423635 F5H768 121 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 F6UB75 175 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 M0QYG6 137 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 ISLRO14498 428 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 PGAM2P15259 253 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 PI3P19957 117 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 RCVRNP35243 200 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 C1orf194Q5T5A4 169 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 OR8G2PQ6IF36 304 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 LHFPL1Q86WI0 220 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 VCX3BQ9H321 246 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
CHCHD3-202ENST00000423635 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 UCP1P25874 307 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 TSPOP30536 169 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 TRIM16LQ309B1 348 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 SP6Q3SY56 376 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 FAM219AQ8IW50 185 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 TMEM208Q9BTX3 173 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 KRTAP1-5Q9BYS1 174 aa11.65□□□□□ -0.54
CHCHD3-202ENST00000423635 CBY3A6NI87 242 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 PRM2P04554 102 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 ATP5G1P05496 136 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 ATP5G3P48201 142 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 B2MP61769 119 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 SUPT4H1P63272 117 aaKnown RBP11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 TTC32Q5I0X7 151 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 ABHD1Q96SE0 405 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 Q9H3A6 140 aa11.64□□□□□ -0.55
CHCHD3-202ENST00000423635 PLAC8L1A1L4L8 177 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 B3GALNT1O75752 331 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 RPS19P39019 145 aaKnown RBP11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 ACY3Q96HD9 319 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 RPRMQ9NS64 109 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 DOK5Q9P104 306 aa11.63□□□□□ -0.55
CHCHD3-202ENST00000423635 A0A1W2PPQ1 181 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 ANKRD65E5RJM6 399 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 CRXO43186 299 aaPredicted RBP11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 CDS2O95674 445 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 XGP55808 180 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 CLINT1Q14677 625 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 PBDC1Q9BVG4 233 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 COPZ2Q9P299 210 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
CHCHD3-202ENST00000423635 ELK1P19419 428 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 TGFBR1P36897 503 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 FCN2Q15485 313 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 C20orf173Q96LM9 149 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
CHCHD3-202ENST00000423635 SMIM31A0A1B0GVY4 71 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 AZU1P20160 251 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 KLF9Q13886 244 aaPredicted RBP11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 SNX29P2Q8IUI4 249 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 ARRDC1Q8N5I2 433 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 CCDC71LQ8N9Z2 235 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 OR4C16Q8NGL9 310 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 ZFAND1Q8TCF1 268 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 TMEM222Q9H0R3 208 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 IGKV1D-37A0A075B6S9 117 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 INSP01308 110 aa11.6□□□□□ -0.55
CHCHD3-202ENST00000423635 MEOX2P50222 304 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms