RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 IGF2-ASQ6U949 168 aa11.05□□□□□ -0.64
CTCFL-203ENST00000422109 TCF24Q7RTU0 167 aa11.05□□□□□ -0.64
CTCFL-203ENST00000422109 NUDT10Q8NFP7 164 aa11.05□□□□□ -0.64
CTCFL-203ENST00000422109 NUDT11Q96G61 164 aa11.05□□□□□ -0.64
CTCFL-203ENST00000422109 WNT10AQ9GZT5 417 aa11.05□□□□□ -0.64
CTCFL-203ENST00000422109 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-203ENST00000422109 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 APCSP02743 223 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
CTCFL-203ENST00000422109 C1orf194Q5T5A4 169 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 Q71RC1 249 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-203ENST00000422109 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 ST6GALNAC6Q969X2 333 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 FXYD5Q96DB9 178 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 MRPL32Q9BYC8 188 aaKnown RBP11.04□□□□□ -0.64
CTCFL-203ENST00000422109 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 A6NNC1 897 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 RBP4P02753 201 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 AMY1AP04745 511 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 BRS3P32247 399 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 TMEM155Q4W5P6 130 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 TPTE2P1Q5T6R2 138 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 NRN1Q9NPD7 142 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
CTCFL-203ENST00000422109 TIMM8BQ9Y5J9 83 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-203ENST00000422109 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
CTCFL-203ENST00000422109 PAX1P15863 534 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 OR2D3Q8NGH3 330 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 C19orf24Q9BVV8 132 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 HILPDAQ9Y5L2 63 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 IGHV2-26A0A0B4J1V2 119 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 A0A1W2PS18 150 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 IGLC7A0M8Q6 106 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 TCAPO15273 167 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 C11orf42Q8N5U0 333 aa11.03□□□□□ -0.64
CTCFL-203ENST00000422109 M0QZ24 198 aa11.02□□□□□ -0.64
CTCFL-203ENST00000422109 GPX1P07203 203 aa11.02□□□□□ -0.64
CTCFL-203ENST00000422109 ZNF137PP52743 207 aa11.02□□□□□ -0.64
CTCFL-203ENST00000422109 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.64
CTCFL-203ENST00000422109 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.64
CTCFL-203ENST00000422109 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.64
CTCFL-203ENST00000422109 NUP35Q8NFH5 326 aa11.02□□□□□ -0.64
CTCFL-203ENST00000422109 HIGD1CA8MV81 97 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 CNIH1O95406 144 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
CTCFL-203ENST00000422109 TMEM30BQ3MIR4 351 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 LCN12Q6JVE5 192 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 WDR73Q6P4I2 378 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.65
CTCFL-203ENST00000422109 DLX6P56179 175 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 PMCHL1Q16048 86 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 TBR1Q16650 682 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 KLF17Q5JT82 389 aaPredicted RBP11.01□□□□□ -0.65
CTCFL-203ENST00000422109 LINC00322Q6ZN03 302 aaPredicted RBP11.01□□□□□ -0.65
CTCFL-203ENST00000422109 PNKDQ8N490 385 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 NEU1Q99519 415 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 SMIM27A0A1W2PRY6 76 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 M0R143 59 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
CTCFL-203ENST00000422109 SPACA3Q8IXA5 215 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 C22orf15Q8WYQ4 148 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 RPEQ96AT9 228 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 CHODLQ9H9P2 273 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 CD3EP07766 207 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 MC5RP33032 325 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 BEND2Q8NDZ0 799 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 PERPQ96FX8 193 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
CTCFL-203ENST00000422109 IGHV1-3A0A0C4DH29 117 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 HYPMO75409 117 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 ARF6P62330 175 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 Q0VG73 95 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 RNF2Q99496 336 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 SIGLEC9Q9Y336 463 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 PPIAL4CA0A0B4J2A2 164 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 KIR2DL5BA0A0G2JN68 375 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 KIR2DL5BA0A0G2JPC4 375 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 SH2D7A6NKC9 451 aaPredicted RBP11□□□□□ -0.65
CTCFL-203ENST00000422109 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 TMEM11P17152 192 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 ATP5IP56385 69 aaPredicted RBP11□□□□□ -0.65
CTCFL-203ENST00000422109 TMEM183BQ1AE95 376 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 KIR2DL5AQ8N109 375 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 KCNS1Q96KK3 526 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 NGBQ9NPG2 151 aa11□□□□□ -0.65
CTCFL-203ENST00000422109 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms