RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 ALKAL2Q6UX46 152 aa16.61■□□□□ 0.25
ABCF3-202ENST00000421340 DPPA3Q6W0C5 159 aa16.61■□□□□ 0.25
ABCF3-202ENST00000421340 PRIMA1Q86XR5 153 aa16.61■□□□□ 0.25
ABCF3-202ENST00000421340 PLA2G2EQ9NZK7 142 aa16.61■□□□□ 0.25
ABCF3-202ENST00000421340 WI2-2373I1.2A0A1W2PRP0 233 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 YIF1AO95070 293 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 HSPB1P04792 205 aaKnown RBP16.6■□□□□ 0.25
ABCF3-202ENST00000421340 M6PRP20645 277 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 GATA2P23769 480 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-202ENST00000421340 AKR1C8PQ5T2L2 129 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 LRRC20Q8TCA0 184 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 UBQLN2Q9UHD9 624 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 NF1P21359 2839 aa16.6■□□□□ 0.25
ABCF3-202ENST00000421340 ELOA3CA0A087WX78 387 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-202ENST00000421340 ANKRD34BA5PLL1 514 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 PPP5D1E7EU14 171 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 BMPR1BO00238 502 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 RGS13O14921 159 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 TMEM41BQ5BJD5 291 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 OR1L4Q8NGR5 311 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 RNF141Q8WVD5 230 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 ZNF414Q96IQ9 312 aa16.59■□□□□ 0.25
ABCF3-202ENST00000421340 NIPBLQ6KC79 2804 aaeCLIP16.59■□□□□ 0.25
ABCF3-202ENST00000421340 NDUFA4O00483 81 aa16.58■□□□□ 0.24
ABCF3-202ENST00000421340 TRBV12-3P01733 135 aa16.58■□□□□ 0.24
ABCF3-202ENST00000421340 GPHB5Q86YW7 130 aa16.58■□□□□ 0.24
ABCF3-202ENST00000421340 GATAD1Q8WUU5 269 aa16.58■□□□□ 0.24
ABCF3-202ENST00000421340 PFDN5Q99471 154 aa16.58■□□□□ 0.24
ABCF3-202ENST00000421340 CITED2Q99967 270 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-202ENST00000421340 DNAJC4Q9NNZ3 241 aa16.58■□□□□ 0.24
ABCF3-202ENST00000421340 TEP1Q99973 2627 aaKnown RBP16.58■□□□□ 0.24
ABCF3-202ENST00000421340 KRTAP24-1Q3LI83 254 aa16.57■□□□□ 0.24
ABCF3-202ENST00000421340 AWAT1Q58HT5 328 aa16.57■□□□□ 0.24
ABCF3-202ENST00000421340 OR5B12Q96R08 314 aa16.57■□□□□ 0.24
ABCF3-202ENST00000421340 RNF2Q99496 336 aa16.57■□□□□ 0.24
ABCF3-202ENST00000421340 RPRMQ9NS64 109 aa16.57■□□□□ 0.24
ABCF3-202ENST00000421340 PUS1Q9Y606 427 aaKnown RBP eCLIP16.57■□□□□ 0.24
ABCF3-202ENST00000421340 C2CD3Q4AC94 2353 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 HYPMO75409 117 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 ELLP55199 621 aaPredicted RBP16.56■□□□□ 0.24
ABCF3-202ENST00000421340 TOMM20LQ6UXN7 152 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 S100A7AQ86SG5 101 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 OR10G4Q8NGN3 311 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 OR10G9Q8NGN4 311 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 OR10G7Q8NGN6 311 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 RNF125Q96EQ8 232 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 VSIRQ9H7M9 311 aa16.56■□□□□ 0.24
ABCF3-202ENST00000421340 MRPL27Q9P0M9 148 aaKnown RBP16.56■□□□□ 0.24
ABCF3-202ENST00000421340 SEC14L6B5MCN3 397 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 IL4P05112 153 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 ZP3P21754 424 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 S100A7P31151 101 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 KRTAP10-3P60369 221 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 FAM106AQ4KMX7 169 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 KHDC1LQ5JSQ8 128 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 NDUFA11Q86Y39 141 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 RPP25LQ8N5L8 163 aaKnown RBP16.55■□□□□ 0.24
ABCF3-202ENST00000421340 TMEM37Q8WXS4 190 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 SAT2Q96F10 170 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-202ENST00000421340 ZFAND3Q9H8U3 227 aa16.55■□□□□ 0.24
ABCF3-202ENST00000421340 COX7A2P2O60397 106 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 OR5G3P0C626 314 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 ORM2P19652 201 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 RAB2AP61019 212 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 RHOBP62745 196 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 FAM74A1Q5RGS3 127 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 C10orf113Q5VZT2 155 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 PATE2Q6UY27 113 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 KLHL30-AS1Q8NEE0 82 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 OR1N2Q8NGR9 330 aa16.54■□□□□ 0.24
ABCF3-202ENST00000421340 ACTR3CQ9C0K3 210 aaPredicted RBP16.54■□□□□ 0.24
ABCF3-202ENST00000421340 NUDT19A8MXV4 375 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 LINC01619G3V211 115 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 LYZP61626 148 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 BLOC1S1P78537 153 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 RPEL1Q2QD12 228 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 GCSAMLQ5JQS6 135 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 C18orf65Q6ZTR6 163 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 C11orf44Q8N8P7 122 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 OR1B1Q8NGR6 318 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 TMEM158Q8WZ71 300 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 MRPL32Q9BYC8 188 aaKnown RBP16.53■□□□□ 0.24
ABCF3-202ENST00000421340 HIGD1AQ9Y241 93 aa16.53■□□□□ 0.24
ABCF3-202ENST00000421340 IGHV4OR15-8A0A075B7B6 117 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 A0A087WW49 117 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 K7EMT4 169 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 LGALS9O00182 355 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 OR11H1Q8NG94 326 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 DPF1Q92782 380 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 PFDN2Q9UHV9 154 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 RNF24Q9Y225 148 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 FUT9Q9Y231 359 aa16.52■□□□□ 0.24
ABCF3-202ENST00000421340 IGHV3-35A0A0C4DH35 117 aa16.51■□□□□ 0.23
ABCF3-202ENST00000421340 A0A1W2PPV4 95 aa16.51■□□□□ 0.23
ABCF3-202ENST00000421340 ADARB2-AS1A8MUL3 147 aa16.51■□□□□ 0.23
ABCF3-202ENST00000421340 ZNF705EA8MWA4 302 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-202ENST00000421340 KLF5Q13887 457 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-202ENST00000421340 USF2Q15853 346 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-202ENST00000421340 REC114Q7Z4M0 266 aa16.51■□□□□ 0.23
ABCF3-202ENST00000421340 FAM213BQ8TBF2 198 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms