RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 A0A0B4J2A0 478 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 IGLL5B9A064 214 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 FAM90A26D6RGX4 464 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 BUB3O43684 328 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 NXPH3O95157 252 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 NUP62P37198 522 aaPredicted RBP12.57□□□□□ -0.4
MSH6-203ENST00000420813 CCR6P51684 374 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 WDR12Q9GZL7 423 aaKnown RBP12.57□□□□□ -0.4
MSH6-203ENST00000420813 HSPB7Q9UBY9 170 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 SHPKQ9UHJ6 478 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 TBC1D24Q9ULP9 559 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 DNAH6Q9C0G6 4158 aa12.57□□□□□ -0.4
MSH6-203ENST00000420813 TRAV10A0A0B4J240 114 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 IFNA10P01566 189 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 HLA-DMBP28068 263 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 S100A5P33763 92 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 ATP5IP56385 69 aaPredicted RBP12.56□□□□□ -0.4
MSH6-203ENST00000420813 NUTF2P61970 127 aaKnown RBP12.56□□□□□ -0.4
MSH6-203ENST00000420813 PRR20EP86478 221 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 PRR20CP86479 221 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 PRR20DP86480 221 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 PRR20BP86481 221 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 PRR20AP86496 221 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 SMCO1Q147U7 214 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 SIGLEC15Q6ZMC9 328 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 CENPSQ8N2Z9 138 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 DTD1Q8TEA8 209 aa12.56□□□□□ -0.4
MSH6-203ENST00000420813 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 PSG1P11464 419 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 SRPXP78539 464 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 ZNF846Q147U1 533 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 LGI3Q8N145 548 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 OR51G1Q8NGK1 321 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 PRR13Q9NZ81 148 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
MSH6-203ENST00000420813 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
MSH6-203ENST00000420813 H3BMM0 161 aa12.54□□□□□ -0.4
MSH6-203ENST00000420813 ANXA3P12429 323 aa12.54□□□□□ -0.4
MSH6-203ENST00000420813 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
MSH6-203ENST00000420813 KLF9Q13886 244 aaPredicted RBP12.54□□□□□ -0.4
MSH6-203ENST00000420813 OR8G2PQ6IF36 304 aa12.54□□□□□ -0.4
MSH6-203ENST00000420813 Q6ZTC4 211 aa12.54□□□□□ -0.4
MSH6-203ENST00000420813 RNF125Q96EQ8 232 aa12.54□□□□□ -0.4
MSH6-203ENST00000420813 RBKSQ9H477 322 aa12.54□□□□□ -0.4
MSH6-203ENST00000420813 AKR1C4P17516 323 aa12.53□□□□□ -0.4
MSH6-203ENST00000420813 GPX4P36969 197 aaPredicted RBP12.53□□□□□ -0.4
MSH6-203ENST00000420813 NKX2-1P43699 371 aaPredicted RBP12.53□□□□□ -0.4
MSH6-203ENST00000420813 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
MSH6-203ENST00000420813 SOSTQ9BQB4 213 aa12.53□□□□□ -0.4
MSH6-203ENST00000420813 MCUBQ9NWR8 336 aa12.53□□□□□ -0.4
MSH6-203ENST00000420813 DUXBA0A1W2PPF3 345 aa12.52□□□□□ -0.41
MSH6-203ENST00000420813 HLA-DRB4P13762 266 aa12.52□□□□□ -0.41
MSH6-203ENST00000420813 RNF126Q9BV68 326 aa12.52□□□□□ -0.41
MSH6-203ENST00000420813 HLA-DRB4X5D2U9 266 aa12.52□□□□□ -0.41
MSH6-203ENST00000420813 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 ZFP92A6NM28 416 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 FABP1P07148 127 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 GAMTQ14353 236 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 OR1S1Q8NH92 325 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 SLC35E1Q96K37 410 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 XCL2Q9UBD3 114 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
MSH6-203ENST00000420813 IGKV1D-37A0A075B6S9 117 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 FABP12A6NFH5 140 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 AMBPP02760 352 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 TNFSF8P32971 234 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 FAUP35544 74 aaKnown RBP12.5□□□□□ -0.41
MSH6-203ENST00000420813 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 C1orf194Q5T5A4 169 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 NEU1Q99519 415 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 PBDC1Q9BVG4 233 aa12.5□□□□□ -0.41
MSH6-203ENST00000420813 PITX3O75364 302 aa12.49□□□□□ -0.41
MSH6-203ENST00000420813 ZNF90Q03938 601 aa12.49□□□□□ -0.41
MSH6-203ENST00000420813 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
MSH6-203ENST00000420813 ZNF705AQ6ZN79 300 aaPredicted RBP12.49□□□□□ -0.41
MSH6-203ENST00000420813 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
MSH6-203ENST00000420813 HECTD4Q9Y4D8 3996 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 SLC25A6P12236 298 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 ID1P41134 155 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 PSMB3P49720 205 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 RAB11AP62491 216 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 TMEM128Q5BJH2 165 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 CCDC190Q86UF4 302 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 LRTM2Q8N967 370 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 TRGV9Q99603 122 aa12.48□□□□□ -0.41
MSH6-203ENST00000420813 SAV1Q9H4B6 383 aaPredicted RBP12.48□□□□□ -0.41
MSH6-203ENST00000420813 SMIM9A6NGZ8 99 aa12.47□□□□□ -0.41
MSH6-203ENST00000420813 ZNF705FA8MVS1 300 aaPredicted RBP12.47□□□□□ -0.41
MSH6-203ENST00000420813 SNRPGP15A8MWD9 76 aa12.47□□□□□ -0.41
MSH6-203ENST00000420813 SOCS3O14543 225 aa12.47□□□□□ -0.41
MSH6-203ENST00000420813 ZNF705DP0CH99 300 aaPredicted RBP12.47□□□□□ -0.41
MSH6-203ENST00000420813 ZNF705BP0CI00 300 aaPredicted RBP12.47□□□□□ -0.41
MSH6-203ENST00000420813 AP3S2P59780 193 aa12.47□□□□□ -0.41
MSH6-203ENST00000420813 LYZP61626 148 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms