RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
PTCD1-202ENST00000419981 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
PTCD1-202ENST00000419981 SCP2D1Q9UJQ7 156 aa12.48□□□□□ -0.41
PTCD1-202ENST00000419981 CELA1Q9UNI1 258 aa12.48□□□□□ -0.41
PTCD1-202ENST00000419981 U3KQ87 197 aa12.48□□□□□ -0.41
PTCD1-202ENST00000419981 ANKRD20A5PA0PJZ0 165 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 H3BMM0 161 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-202ENST00000419981 CCR6P51684 374 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 SMCO1Q147U7 214 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 RNF125Q96EQ8 232 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 SCGB3A2Q96PL1 93 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 RNF126Q9BV68 326 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 XCL2Q9UBD3 114 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 HSPB7Q9UBY9 170 aa12.47□□□□□ -0.41
PTCD1-202ENST00000419981 A0A0B4J2A0 478 aa12.46□□□□□ -0.41
PTCD1-202ENST00000419981 ALDH3B2P48448 385 aa12.46□□□□□ -0.41
PTCD1-202ENST00000419981 LGI3Q8N145 548 aa12.46□□□□□ -0.41
PTCD1-202ENST00000419981 RBKSQ9H477 322 aa12.46□□□□□ -0.41
PTCD1-202ENST00000419981 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
PTCD1-202ENST00000419981 SHPKQ9UHJ6 478 aa12.46□□□□□ -0.41
PTCD1-202ENST00000419981 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
PTCD1-202ENST00000419981 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 AMBPP02760 352 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 AKR1C4P17516 323 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-202ENST00000419981 KLF9Q13886 244 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-202ENST00000419981 C12orf74Q32Q52 190 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 ZNF767PQ75MW2 155 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 PBDC1Q9BVG4 233 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 MCUBQ9NWR8 336 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
PTCD1-202ENST00000419981 ZFP92A6NM28 416 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 ANXA3P12429 323 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
PTCD1-202ENST00000419981 SRPXP78539 464 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 LYZL2Q7Z4W2 148 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 DYNC2LI1Q8TCX1 351 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 RAB2BQ8WUD1 216 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 SLC35E1Q96K37 410 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 KRTAP17-1Q9BYP8 105 aa12.44□□□□□ -0.42
PTCD1-202ENST00000419981 RSL24D1Q9UHA3 163 aaKnown RBP12.44□□□□□ -0.42
PTCD1-202ENST00000419981 ATP5IP56385 69 aaPredicted RBP12.43□□□□□ -0.42
PTCD1-202ENST00000419981 OR1S1Q8NH92 325 aa12.43□□□□□ -0.42
PTCD1-202ENST00000419981 FABP1P07148 127 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 GPX4P36969 197 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-202ENST00000419981 ID1P41134 155 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 ZNF90Q03938 601 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 GAMTQ14353 236 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 GDF5OSQ5U4N7 250 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 LINC00052Q96N35 136 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 NEU1Q99519 415 aa12.42□□□□□ -0.42
PTCD1-202ENST00000419981 HECTD4Q9Y4D8 3996 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 PSMB3P49720 205 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 LYZP61626 148 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 ZNF705AQ6ZN79 300 aaPredicted RBP12.41□□□□□ -0.42
PTCD1-202ENST00000419981 COQ8AQ8NI60 647 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 BCL7BQ9BQE9 202 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 NDUFAF3Q9BU61 184 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 WDR12Q9GZL7 423 aaKnown RBP12.41□□□□□ -0.42
PTCD1-202ENST00000419981 SAV1Q9H4B6 383 aaPredicted RBP12.41□□□□□ -0.42
PTCD1-202ENST00000419981 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
PTCD1-202ENST00000419981 DUXBA0A1W2PPF3 345 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 ZNF705FA8MVS1 300 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-202ENST00000419981 ZNF705DP0CH99 300 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-202ENST00000419981 ZNF705BP0CI00 300 aaPredicted RBP12.4□□□□□ -0.42
PTCD1-202ENST00000419981 P0DMU3 169 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 FAM231AP0DMU4 169 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 FAM231CP0DMU5 169 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 TMBIM6P55061 237 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 FXYD7P58549 80 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 DEFB1P60022 68 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 FOXI2Q6ZQN5 318 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.42
PTCD1-202ENST00000419981 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
PTCD1-202ENST00000419981 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
PTCD1-202ENST00000419981 FABP12A6NFH5 140 aa12.39□□□□□ -0.43
PTCD1-202ENST00000419981 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
PTCD1-202ENST00000419981 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
PTCD1-202ENST00000419981 FAUP35544 74 aaKnown RBP12.39□□□□□ -0.43
PTCD1-202ENST00000419981 RAB11AP62491 216 aa12.39□□□□□ -0.43
PTCD1-202ENST00000419981 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
PTCD1-202ENST00000419981 SNRPGP15A8MWD9 76 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 SOCS3O14543 225 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 NOL3O60936 208 aaKnown RBP12.38□□□□□ -0.43
PTCD1-202ENST00000419981 IAPPP10997 89 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 EMP1P54849 157 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 OR2F1Q13607 317 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 SPATA31B1PQ5VZV4 182 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 TMED4Q7Z7H5 227 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
PTCD1-202ENST00000419981 POM121L12Q8N7R1 296 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms