RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MS4A10Q96PG2 267 aa11.05□□□□□ -0.64
SHMT1P1-201ENST00000419974 PFDN5Q99471 154 aa11.05□□□□□ -0.64
SHMT1P1-201ENST00000419974 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
SHMT1P1-201ENST00000419974 WI2-2373I1.2A0A1W2PRP0 233 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 LINC00862A6NCI5 91 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 ZNF705EA8MWA4 302 aaPredicted RBP11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 NUPL2O15504 423 aaKnown RBP11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 TGOLN2O43493 480 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 OR5G3P0C626 314 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 PF4V1P10720 104 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 ZNF616Q08AN1 781 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 Q56UQ5 140 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 S100A7AQ86SG5 101 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 ZNF329Q86UD4 541 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 KLHDC1Q8N7A1 406 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 OR51G1Q8NGK1 321 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 OR10G4Q8NGN3 311 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 OR10G9Q8NGN4 311 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 OR10G7Q8NGN6 311 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 OR4F5Q8NH21 305 aa11.04□□□□□ -0.64
SHMT1P1-201ENST00000419974 IGHV3-21A0A0B4J1V1 117 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 HBE1P02100 147 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 PSG1P11464 419 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 ADMP35318 185 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 ZNF600Q6ZNG1 722 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 Q8WTZ3 238 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 ZNF414Q96IQ9 312 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 ACTR3CQ9C0K3 210 aaPredicted RBP11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 VSIRQ9H7M9 311 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 MRPL27Q9P0M9 148 aaKnown RBP11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 ANK2Q01484 3957 aa11.03□□□□□ -0.64
SHMT1P1-201ENST00000419974 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 TEX46H3BTG2 121 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 S100A7P31151 101 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 RHOBP62745 196 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 ZNF726P1Q15940 193 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 TIGITQ495A1 244 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 TMEM37Q8WXS4 190 aa11.02□□□□□ -0.65
SHMT1P1-201ENST00000419974 CLPSL1A2RUU4 121 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 HYPMO75409 117 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 H2AFB1P0C5Y9 115 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 FHITP49789 147 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 ELLP55199 621 aaPredicted RBP11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 PROK1P58294 105 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 RAB2AP61019 212 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 OR4X2Q8NGF9 303 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 FAM213BQ8TBF2 198 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 CHRDL1Q9BU40 450 aa11.01□□□□□ -0.65
SHMT1P1-201ENST00000419974 A0A1W2PPV4 95 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 NDUFS6O75380 124 aaKnown RBP11□□□□□ -0.65
SHMT1P1-201ENST00000419974 LGALS1P09382 135 aaKnown RBP11□□□□□ -0.65
SHMT1P1-201ENST00000419974 STAG3L2P0CL84 134 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 STAG3L3P0CL85 134 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 GATA2P23769 480 aaPredicted RBP11□□□□□ -0.65
SHMT1P1-201ENST00000419974 GPR183P32249 361 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 CDC34P49427 236 aaPredicted RBP11□□□□□ -0.65
SHMT1P1-201ENST00000419974 SRSF2Q01130 221 aaKnown RBP11□□□□□ -0.65
SHMT1P1-201ENST00000419974 CLEC19AQ6UXS0 136 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 PATE2Q6UY27 113 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 IL34Q6ZMJ4 242 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 SUN5Q8TC36 379 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 RAB24Q969Q5 203 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 RNF125Q96EQ8 232 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
SHMT1P1-201ENST00000419974 FUT9Q9Y231 359 aa11□□□□□ -0.65
SHMT1P1-201ENST00000419974 I3L521 148 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 NDUFA4O00483 81 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 GGCTO75223 188 aaKnown RBP10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 RPLP1P05386 114 aaKnown RBP10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 TAS2R45P59539 299 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 GCSAMLQ5JQS6 135 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 TCTEX1D4Q5JR98 221 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 C10orf113Q5VZT2 155 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 GPHB5Q86YW7 130 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 STXBP6Q8NFX7 210 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 SMDT1Q9H4I9 107 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 SEPSECSQ9HD40 501 aaKnown RBP10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 TECRQ9NZ01 308 aaKnown RBP10.99□□□□□ -0.65
SHMT1P1-201ENST00000419974 RAB19A4D1S5 217 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 BMPR1BO00238 502 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 COX7A2P2O60397 106 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 ARL3P36405 182 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 TAGLN2P37802 199 aaKnown RBP10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 FAM78BQ5VT40 261 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 PQLC2Q6ZP29 291 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 C4orf3Q8WVX3 66 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 TMEM190Q8WZ59 177 aa10.98□□□□□ -0.65
SHMT1P1-201ENST00000419974 PUS1Q9Y606 427 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms