RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 MARC2Q969Z3 335 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 FAM210AQ96ND0 272 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 FANCD2OSQ96PS1 177 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 ATP6V0BQ99437 205 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 TXN2Q99757 166 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 VSIRQ9H7M9 311 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 GNB4Q9HAV0 340 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 TREM1Q9NP99 234 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 TECRQ9NZ01 308 aaKnown RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 MRPL36Q9P0J6 103 aaKnown RBP4.67□□□□□ -1.66
HMGB3-202ENST00000419110 DOK5Q9P104 306 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 GNG13Q9P2W3 67 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 RNF24Q9Y225 148 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 FUT9Q9Y231 359 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 HIGD1AQ9Y241 93 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 RFNGQ9Y644 331 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 MTORP42345 2549 aa4.67□□□□□ -1.66
HMGB3-202ENST00000419110 NSD1Q96L73 2696 aaPredicted RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 IGKV1D-37A0A075B6S9 117 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 TRBV7-1A0A0A6YYK4 115 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 TRBV9A0A0B4J1U6 114 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 A0A0G2JLM5 398 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 LOC102723971A0A1B0GUV8 181 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 TMEM89A2RUT3 159 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 PSMB11A5LHX3 300 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 OR2T8A6NH00 312 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 KRBOX1C9JBD0 128 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 CLDN34H7C241 214 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 BMPR1BO00238 502 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 TGOLN2O43493 480 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 HYPMO75409 117 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 NDUFB8O95169 186 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 BRI3O95415 125 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 IGLV1-40P01703 118 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 FOSL1P15407 271 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 PSMB3P49720 205 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 FGF8P55075 233 aaPredicted RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ZNF90Q03938 601 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 RELQ04864 619 aaPredicted RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ATP5G2Q06055 141 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 PEA15Q15121 130 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ZNF726P1Q15940 193 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 GUK1Q16774 197 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 KLK9Q2XQG4 91 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 GCSAMLQ5JQS6 135 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 FAM78BQ5VT40 261 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 SPSB3Q6PJ21 355 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 PQLC2Q6ZP29 291 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 SSX7Q7RTT5 188 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 RPP25LQ8N5L8 163 aaKnown RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 OR5AU1Q8NGC0 362 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 OR51G1Q8NGK1 321 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 OR1B1Q8NGR6 318 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ZNF502Q8TBZ5 544 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 MBD3L1Q8WWY6 194 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 USMG5Q96IX5 58 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 NOL4LQ96MY1 436 aaPredicted RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 EIF5A2Q9GZV4 153 aaKnown RBP4.66□□□□□ -1.66
HMGB3-202ENST00000419110 SMDT1Q9H4I9 107 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ZNF702PQ9H963 129 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 TMEM167BQ9NRX6 74 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 LINC00527Q9UJ94 153 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 KLK9Q9UKQ9 250 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 ARL2-SNX15V9GYD0 113 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 CELSR1Q9NYQ6 3014 aa4.66□□□□□ -1.66
HMGB3-202ENST00000419110 RBFOX3A6NFN3 312 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 HMGB3O15347 200 aaKnown RBP4.65□□□□□ -1.67
HMGB3-202ENST00000419110 OR2C1O95371 312 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 LY6G6DO95868 133 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 IGKV1-17P01599 117 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 IL4P05112 153 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 CRYBA1P05813 215 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 RNASE1P07998 156 aaKnown RBP4.65□□□□□ -1.67
HMGB3-202ENST00000419110 STAG3L2P0CL84 134 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 STAG3L3P0CL85 134 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 RD3LP0DJH9 198 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 C8orf88P0DMB2 117 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 PSG1P11464 419 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 CD99P14209 185 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 ORM2P19652 201 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 GATA2P23769 480 aaPredicted RBP4.65□□□□□ -1.67
HMGB3-202ENST00000419110 GCHFRP30047 84 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 PLP1P60201 277 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 BLCAPP62952 87 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 MEF2BQ02080 365 aaPredicted RBP4.65□□□□□ -1.67
HMGB3-202ENST00000419110 CFHR3Q02985 330 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 FOXE3Q13461 319 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 HAGHQ16775 308 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF506Q5JVG8 444 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 STXBP6Q8NFX7 210 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 OR4X2Q8NGF9 303 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 Q8WTZ3 238 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 TMEM190Q8WZ59 177 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 CCDC140Q96MF4 163 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 MS4A10Q96PG2 267 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 DUX5Q96PT3 197 aa4.65□□□□□ -1.67
HMGB3-202ENST00000419110 TMEM231Q9H6L2 316 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms