RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CD40P25942 277 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 PCP4P48539 62 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 LEMD1Q68G75 181 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 WFDC8Q8IUA0 241 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 OR4C13Q8NGP0 309 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 HIST1H1EP10412 219 aaKnown RBP12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 PRB3Q04118 309 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 CLEC5AQ9NY25 188 aa12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 TIMM8BQ9Y5J9 83 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 RELQ04864 619 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 GAGE1Q13065 139 aa12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 TMEM200BQ69YZ2 307 aa12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 FXYD5Q96DB9 178 aa12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 SFTPCP11686 197 aa12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
SEMA3B-203ENST00000419007 FAM181BA6NEQ2 426 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 ZNF137PP52743 207 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 EBLN2Q6P2I7 272 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 TNFRSF19Q9NS68 423 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 ZNF841Q6ZN19 808 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 OR5AN1Q8NGI8 311 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 ASCL3Q9NQ33 180 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 MRPL27Q9P0M9 148 aaKnown RBP12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 SH3BGRL2Q9UJC5 107 aa12.23□□□□□ -0.45
SEMA3B-203ENST00000419007 IGKV1D-37A0A075B6S9 117 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 TNFRSF1AP19438 455 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 NHLH1Q02575 133 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 VSTM2AQ8TAG5 236 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 ST6GALNAC6Q969X2 333 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 MBD6Q96DN6 1003 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 RITA1Q96K30 269 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 OR8B2Q96RD0 313 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 ALKBH7Q9BT30 221 aaPredicted RBP12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 ZNF835Q9Y2P0 537 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 SPTA1P02549 2419 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 VWC2LB2RUY7 222 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 TMEM177Q53S58 311 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 KIR3DL3Q8N743 410 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 ANKRD11Q6UB99 2663 aaPredicted RBP12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 TMEM167AQ8TBQ9 72 aa12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
SEMA3B-203ENST00000419007 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 TSPOP30536 169 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 DLX1P56177 255 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 H0Y8G0 127 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 LINC00614P0C842 121 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 UNQ5815/PRO19632Q6UWF5 114 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 LYPD2Q6UXB3 125 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 FAM231DQ6ZW35 169 aa12.21□□□□□ -0.45
SEMA3B-203ENST00000419007 PERPQ96FX8 193 aa12.21□□□□□ -0.46
SEMA3B-203ENST00000419007 CHRDL1Q9BU40 450 aa12.21□□□□□ -0.46
SEMA3B-203ENST00000419007 TP73-AS1Q9UF72 201 aa12.21□□□□□ -0.46
SEMA3B-203ENST00000419007 WASHC3Q9Y3C0 194 aa12.21□□□□□ -0.46
SEMA3B-203ENST00000419007 ATMQ13315 3056 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM238LA0A1B0GVL6 79 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 FAM87AP0C7U9 286 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM11P17152 192 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM30BQ3MIR4 351 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 VMA21Q3ZAQ7 101 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 TEX36Q5VZQ5 186 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 DAZAP1Q96EP5 407 aaKnown RBP12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 C20orf202A1L168 122 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 C22orf46C9J442 243 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 NDUFB3O43676 98 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 NDUFB8O95169 186 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 P01737 135 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 RASL11AQ6T310 242 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
SEMA3B-203ENST00000419007 PPIAL4EA0A075B759 164 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 PPIAL4DF5H284 164 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 FCN3O75636 299 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 PPIAL4FP0DN26 164 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 IGLL1P15814 213 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 FOXC1Q12948 553 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 GPR82Q96P67 336 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 C17orf100A8MU93 164 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 HBBP68871 147 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 C22orf15Q8WYQ4 148 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 RPP21Q9H633 154 aaKnown RBP12.19□□□□□ -0.46
SEMA3B-203ENST00000419007 ZZEF1O43149 2961 aa12.18□□□□□ -0.46
SEMA3B-203ENST00000419007 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
SEMA3B-203ENST00000419007 ADIPOQQ15848 244 aa12.18□□□□□ -0.46
SEMA3B-203ENST00000419007 TMEM186Q96B77 213 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms