RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 POLR2HP52434 150 aaKnown RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 EMP1P54849 157 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 LYZL1Q6UWQ5 148 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 ZNF705AQ6ZN79 300 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 LHFPL1Q86WI0 220 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 C3orf56Q8N813 242 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 NUP35Q8NFH5 326 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR51T1Q8NGJ9 327 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 CMTM2Q8TAZ6 248 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 MALSU1Q96EH3 234 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 MND1Q9BWT6 205 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 ZNF471Q9BX82 626 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 IMUPQ9GZP8 106 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 XAGE1AQ9HD64 81 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 OTORQ9NRC9 128 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 NAT8Q9UHE5 227 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 RNF11Q9Y3C5 154 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 FAM215AQ9Y5M1 114 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 HSPE1-MOB4S4R3N1 261 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYH3P11055 1940 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 DLG5Q8TDM6 1919 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 MAGI2Q86UL8 1455 aa1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 SCAF11Q99590 1463 aaKnown RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 CDK13Q14004 1512 aaKnown RBP1.56□□□□□ -2.16
HMGB1P49-201ENST00000418882 ATG2BQ96BY7 2078 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ADGRB2O60241 1585 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 CFAP74Q9C0B2 1584 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 MAST1Q9Y2H9 1570 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 MYO3AQ8NEV4 1616 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 MADDQ8WXG6 1647 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ZC3H13Q5T200 1668 aaKnown RBP1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 COL5A3P25940 1745 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 IFT172Q9UG01 1749 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ANKRD26Q9UPS8 1709 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 UQCRHLA0A096LP55 91 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 A0A1W2PNM2 257 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ODAMA1E959 279 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 H3BPC8 53 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 J3QKU1 62 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 TMEM256-PLSCR3K7ERE1 68 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 UBFD1O14562 309 aaKnown RBP1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 GNRH2O43555 120 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR2T1O43869 369 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 C1QAP02745 245 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 SHBGP04278 402 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 BPGMP07738 259 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 UQCRHP07919 91 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 CD24P25063 80 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 SMCO1Q147U7 214 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR8D4Q8NGM9 314 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 PFN4Q8NHR9 129 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 SKA2Q8WVK7 121 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 DNAJC9Q8WXX5 260 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 BORCS5Q969J3 196 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 TEX37Q96LM6 180 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 MIEN1Q9BRT3 115 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 DOHHQ9BU89 302 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 C6orf62Q9GZU0 229 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 TUBA4BQ9H853 241 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 RASL12Q9NYN1 266 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 TRAPPC2LQ9UL33 140 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 TECPR2O15040 1411 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 TROQ12816 1431 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ERBINQ96RT1 1412 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ANKRD50Q9ULJ7 1429 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 A2MP01023 1474 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 IQSEC2Q5JU85 1478 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 FANCD2Q9BXW9 1451 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 DUOX2Q9NRD8 1548 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ADAMTS12P58397 1594 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 KIAA0556O60303 1618 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 ABCA6Q8N139 1617 aa1.55□□□□□ -2.16
HMGB1P49-201ENST00000418882 MAST2Q6P0Q8 1798 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 SIPA1L1O43166 1804 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 MAP2P11137 1827 aaKnown RBP1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 LCTP09848 1927 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 IGLV3-9A0A075B6K5 115 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 A0A0J9YW62 118 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 A0A1B0GVG6 124 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 E7EQ34 232 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 CYB5BO43169 146 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 TRGC2P03986 189 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 CLPSP04118 112 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 CXCL1P09341 107 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 GPX2P18283 190 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 OGNP20774 298 aaKnown RBP1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 NFYBP25208 207 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 S100A11P31949 105 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 SLC38A11Q08AI6 406 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR8B8Q15620 311 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 MSMO1Q15800 293 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 SCGB2B2Q4G0G5 96 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 SPANXN3Q5MJ09 141 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 DYNAPQ8N1N2 210 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 MBD3L1Q8WWY6 194 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 AIF1LQ9BQI0 150 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 HSPB9Q9BQS6 159 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 CCDC32Q9BV29 185 aa1.54□□□□□ -2.16
HMGB1P49-201ENST00000418882 OR2J1Q9GZK6 312 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms