RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MDP1Q86V88 176 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 CXorf67Q86X51 503 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 ZADH2Q8N4Q0 377 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 TMEM116Q8NCL8 245 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 DOCK10Q96BY6 2186 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 SDK1Q7Z5N4 2213 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 TEX50A0A1B0GTY4 177 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 KLK10O43240 276 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 MLANAQ16655 118 aa6.49□□□□□ -1.37
HMGXB4-202ENST00000418170 PINLYPA6NC86 204 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 J3QR89 54 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 MOSP00540 346 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 CD69Q07108 199 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 TBC1D28Q2M2D7 210 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 LGALS9BQ3B8N2 356 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 LGALS9CQ6DKI2 356 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF788Q6ZQV5 615 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 FAM222BQ8WU58 562 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 SGK494Q96LW2 274 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 VGLL1Q99990 258 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 PRNDQ9UKY0 176 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 COX7A2P2O60397 106 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 FCGR2BP31994 310 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 LOXL3P58215 753 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 EDDM3AQ14507 147 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 POU2AF1Q16633 256 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 TRAV26-1A0A087WT03 109 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 NPIPB6E9PJ23 425 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 C10orf113Q5VZT2 155 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 GUSBP11Q6P575 273 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 PPP1R32Q7Z5V6 425 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 ITLN1Q8WWA0 313 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 TRIOBPQ9H2D6 2365 aa6.48□□□□□ -1.37
HMGXB4-202ENST00000418170 C22orf46C9J442 243 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 FSTL3O95633 263 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 LTAP01374 205 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 IGHV3-13P01766 116 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 SLC25A5P05141 298 aaKnown RBP6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 RPRMLQ8N4K4 120 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 OR1L4Q8NGR5 311 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 OR1L8Q8NGR8 309 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 ATMQ13315 3056 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 A0A096LNJ9 63 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 RNASE2P10153 161 aaKnown RBP6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 CRYBA4P53673 196 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 DHRS13Q6UX07 377 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 PATE2Q6UY27 113 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 PDPNQ86YL7 162 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 CACNG8Q8WXS5 425 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 DYSFO75923 2080 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 OVOL3O00110 214 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 OR8A1Q8NGG7 326 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 PRSS3P2Q8NHM4 247 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 DAZAP1Q96EP5 407 aaKnown RBP6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 FMC1Q96HJ9 113 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 ZNF48Q96MX3 618 aaPredicted RBP6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 OBP2BQ9NPH6 170 aa6.47□□□□□ -1.37
HMGXB4-202ENST00000418170 F8W1H4 67 aa6.46□□□□□ -1.37
HMGXB4-202ENST00000418170 ACP1P24666 158 aa6.46□□□□□ -1.37
HMGXB4-202ENST00000418170 CR1LQ2VPA4 569 aa6.46□□□□□ -1.37
HMGXB4-202ENST00000418170 CD177Q8N6Q3 437 aa6.46□□□□□ -1.37
HMGXB4-202ENST00000418170 SIGLEC8Q9NYZ4 499 aa6.46□□□□□ -1.37
HMGXB4-202ENST00000418170 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 SPAARA0A1B0GVQ0 90 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 GCSAMQ8N6F7 178 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 OR5AN1Q8NGI8 311 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 FER1L6-AS2Q96M78 137 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 KNTC1P50748 2209 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 PGPA6NDG6 321 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 UPK2O00526 184 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 MC5RP33032 325 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 GATD1Q8NB37 220 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 BLNKQ8WV28 456 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 PI4KAP42356 2102 aa6.46□□□□□ -1.38
HMGXB4-202ENST00000418170 FBLL1A6NHQ2 334 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 C19orf67A6NJJ6 358 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 DLL1O00548 723 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 SAA2P0DJI9 122 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CACNG7P62955 275 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 MRAP2Q96G30 205 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 C18orf15Q96N68 181 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 TCTAP57738 103 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 WFDC2Q14508 124 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 SLC25A48Q6ZT89 311 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 PHLDA1Q8WV24 401 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CXXC4Q9H2H0 198 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 A0A1B0GUT8 65 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 K7EQM0 130 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 NKX2-8O15522 239 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 CELA3AP09093 270 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 FAM106CPP0CH98 169 aa6.45□□□□□ -1.38
HMGXB4-202ENST00000418170 NMUP48645 174 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms