RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 IGSF23A1L1A6 192 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 FAM24AA6NFZ4 105 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 DEDDO75618 318 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 RD3LP0DJH9 198 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 PSG1P11464 419 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 CD81P60033 236 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 DLK1P80370 383 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 OR2F1Q13607 317 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
SKA1-203ENST00000417656 RBPMS2Q6ZRY4 209 aaKnown RBP9.38□□□□□ -0.91
SKA1-203ENST00000417656 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 OR10P1Q8NGE3 313 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 METTL26Q96S19 204 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 RNF2Q99496 336 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 TRGV9Q99603 122 aa9.38□□□□□ -0.91
SKA1-203ENST00000417656 LYRM2Q9NU23 88 aaPredicted RBP9.38□□□□□ -0.91
SKA1-203ENST00000417656 TRAV25A0A0B4J276 109 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 CST7O76096 145 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 FABP1P07148 127 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 CXCL3P19876 107 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 NPPCP23582 126 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 LYZP61626 148 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 OXA1LQ15070 435 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 FCN2Q15485 313 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 Q8N1Y9 231 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 OR51G1Q8NGK1 321 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 PPP1R1CQ8WVI7 109 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 OR5AC2Q9NZP5 309 aa9.37□□□□□ -0.91
SKA1-203ENST00000417656 LOC100996750A0A140TA64 210 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 H0YIZ8 118 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
SKA1-203ENST00000417656 CD7P09564 240 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 CRYBB3P26998 211 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 BMI1P35226 326 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 CYCSP99999 105 aaKnown RBP9.36□□□□□ -0.91
SKA1-203ENST00000417656 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 LAMTOR1Q6IAA8 161 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 TCF24Q7RTU0 167 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 TMEM144Q7Z5S9 345 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 TMEM252Q8N6L7 170 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 TMEM217Q8N7C4 229 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 OR11H7Q8NGC8 314 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
SKA1-203ENST00000417656 NEURL2Q9BR09 285 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 KRTAP4-6Q9BYQ5 205 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 MED28Q9H204 178 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 SMAD5-AS1Q9Y6J3 95 aa9.36□□□□□ -0.91
SKA1-203ENST00000417656 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 TSPAN4O14817 238 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 GATA2P23769 480 aaPredicted RBP9.35□□□□□ -0.91
SKA1-203ENST00000417656 P2RY1P47900 373 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 SULT1A1P50225 295 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 STX12Q86Y82 276 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 LILRB2Q8N423 598 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 NARS2Q96I59 477 aaKnown RBP9.35□□□□□ -0.91
SKA1-203ENST00000417656 TMEM231Q9H6L2 316 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 RABAC1Q9UI14 185 aa9.35□□□□□ -0.91
SKA1-203ENST00000417656 A0A1W2PS18 150 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 E5RGE8 158 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 DFFBO76075 338 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 MPC2O95563 127 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 RLN2P04090 185 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 TFPI2P48307 235 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 EWSR1Q01844 656 aaKnown RBP eCLIP9.34□□□□□ -0.91
SKA1-203ENST00000417656 FAM90A2PQ658T7 463 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 TMEM182Q6ZP80 229 aaPredicted RBP9.34□□□□□ -0.91
SKA1-203ENST00000417656 CYP2G1PQ6ZSU1 146 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 GGACTQ9BVM4 153 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 U3KQE9 123 aa9.34□□□□□ -0.91
SKA1-203ENST00000417656 UBE2L5PA0A1B0GUS4 154 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 FRMD6-AS1P0C7T7 363 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 PET100P0DJ07 73 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 EIF2B2P49770 351 aaKnown RBP9.33□□□□□ -0.92
SKA1-203ENST00000417656 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 TEPPQ6URK8 271 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 GBGT1Q8N5D6 347 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 BPIFCQ8NFQ6 507 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 TMEM147Q9BVK8 224 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 MBD2Q9UBB5 411 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
SKA1-203ENST00000417656 LINC00869P0C866 280 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 RPL11P62913 178 aaKnown RBP9.32□□□□□ -0.92
SKA1-203ENST00000417656 HBG1P69891 147 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 HBG2P69892 147 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 VWC2Q2TAL6 325 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 ODF3L2Q3SX64 289 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 DEFB125Q8N687 156 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 STPG3Q8N7X2 389 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 GLMPQ8WWB7 406 aa9.32□□□□□ -0.92
SKA1-203ENST00000417656 MGST2Q99735 147 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms