RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TMEM88Q6PEY1 159 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 C1orf158Q8N1D5 194 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 C15orf53Q8NAA6 179 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 GLYATL2Q8WU03 294 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 ABHD1Q96SE0 405 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
DDX56-202ENST00000415758 PFDN2Q9UHV9 154 aa10.88□□□□□ -0.67
DDX56-202ENST00000415758 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
DDX56-202ENST00000415758 LRP1BQ9NZR2 4599 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 C16orf90A8MZG2 172 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 SOCS3O14543 225 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 HBE1P02100 147 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 ID1P41134 155 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 PSMB3P49720 205 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 PAX9P55771 341 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 OR8G2PQ6IF36 304 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 NOXA1Q86UR1 476 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 OR51G1Q8NGK1 321 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 OR13C8Q8NGS7 320 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 RNF125Q96EQ8 232 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 LINC00052Q96N35 136 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 SLC35B3Q9H1N7 401 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 MTFP1Q9UDX5 166 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 CACFD1Q9UGQ2 172 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 GOLT1BQ9Y3E0 138 aa10.87□□□□□ -0.67
DDX56-202ENST00000415758 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 HPGDSO60760 199 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 HTN3P15516 51 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 ALDH3B2P48448 385 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 PSG9Q00887 426 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 RRN3P1Q2M238 152 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 SELENOHQ8IZQ5 122 aaKnown RBP10.86□□□□□ -0.67
DDX56-202ENST00000415758 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 RBPMSQ93062 196 aaKnown RBP10.86□□□□□ -0.67
DDX56-202ENST00000415758 GPR146Q96CH1 333 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 ACY3Q96HD9 319 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 CACNG5Q9UF02 275 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 TMED3Q9Y3Q3 217 aa10.86□□□□□ -0.67
DDX56-202ENST00000415758 TEX13DA0A0J9YY54 714 aaPredicted RBP10.85□□□□□ -0.67
DDX56-202ENST00000415758 ATP6V1G2O95670 118 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 RORCP51449 518 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 DAD1P61803 113 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 NMSQ5H8A3 153 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 OR4D10Q8NGI6 311 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 OR52I2Q8NH67 350 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 MARCH1Q8TCQ1 289 aa10.85□□□□□ -0.67
DDX56-202ENST00000415758 A0A0J9YX75 114 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 CEBPZOSA8MTT3 80 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 A8MTW9 85 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 ISLRO14498 428 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
DDX56-202ENST00000415758 KLF9Q13886 244 aaPredicted RBP10.84□□□□□ -0.67
DDX56-202ENST00000415758 FAM78BQ5VT40 261 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 EBLN2Q6P2I7 272 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 Q8N1X5 172 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 TMEM229BQ8NBD8 167 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 C7orf50Q9BRJ6 194 aaKnown RBP10.84□□□□□ -0.67
DDX56-202ENST00000415758 RTBDNQ9BSG5 229 aaPredicted RBP10.84□□□□□ -0.67
DDX56-202ENST00000415758 U3KQ87 197 aa10.84□□□□□ -0.67
DDX56-202ENST00000415758 SCGB2B2Q4G0G5 96 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 SAMD13Q5VXD3 122 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 GSG1LQ6UXU4 331 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 COQ8AQ8NI60 647 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 ATG101Q9BSB4 218 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 PBDC1Q9BVG4 233 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 TMEM56-RWDD3S4R434 201 aa10.83□□□□□ -0.68
DDX56-202ENST00000415758 IGKV1D-37A0A075B6S9 117 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 F6UB75 175 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 TAS2R19P59542 299 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 NCS1P62166 190 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
DDX56-202ENST00000415758 RNASE12Q5GAN4 147 aaKnown RBP10.82□□□□□ -0.68
DDX56-202ENST00000415758 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 IGF2BP2-AS1Q96M15 143 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 MAGT1Q9H0U3 335 aa10.82□□□□□ -0.68
DDX56-202ENST00000415758 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 FAM25AB3EWG3 89 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 FAM25CB3EWG5 89 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 FAM25GB3EWG6 89 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 TNFAIP8O95379 198 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 RAB3DO95716 219 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
DDX56-202ENST00000415758 ATP5IP56385 69 aaPredicted RBP10.81□□□□□ -0.68
DDX56-202ENST00000415758 ZNF90Q03938 601 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 GAMTQ14353 236 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 MEF2DQ14814 521 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 TMEM268Q5VZI3 342 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 STEAP1BQ6NZ63 245 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 C15orf40Q8WUR7 153 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 RPRMQ9NS64 109 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 DOK5Q9P104 306 aa10.81□□□□□ -0.68
DDX56-202ENST00000415758 C14orf166Q9Y224 244 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms