RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SLC25A22Q9H936 323 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 TECRQ9NZ01 308 aaKnown RBP11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 FUT9Q9Y231 359 aa11.1□□□□□ -0.63
HMGA1P1-201ENST00000415560 MYO9AB2RTY4 2548 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 CXorf1O96002 111 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 CTSGP08311 255 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 PSMB8P28062 276 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 GPR183P32249 361 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 DEFA5Q01523 94 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 ZNF726P1Q15940 193 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 GCSAMLQ5JQS6 135 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
HMGA1P1-201ENST00000415560 A0A1B0GV50 99 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 TGOLN2O43493 480 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 STAG3L2P0CL84 134 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 STAG3L3P0CL85 134 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 C8orf88P0DMB2 117 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 ARL3P36405 182 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 PSMB3P49720 205 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 LYZP61626 148 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 PEA15Q15121 130 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 EIF4E3Q8N5X7 224 aaKnown RBP11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 CITED4Q96RK1 184 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 KLK15Q9H2R5 256 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 C16orf95Q9H693 158 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 SERTAD4Q9NUC0 356 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 DOK5Q9P104 306 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 HIGD1AQ9Y241 93 aa11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 SETXQ7Z333 2677 aaKnown RBP11.08□□□□□ -0.64
HMGA1P1-201ENST00000415560 ZANQ9Y493 2812 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 OR2C1O95371 312 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 IL4P05112 153 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 TAGLN2P37802 199 aaKnown RBP11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 KHDC3LQ587J8 217 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 ZNF343Q6P1L6 599 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 PQLC2Q6ZP29 291 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 STXBP6Q8NFX7 210 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 OR4X2Q8NGF9 303 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 RNF125Q96EQ8 232 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 EIF5A2Q9GZV4 153 aaKnown RBP11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
HMGA1P1-201ENST00000415560 ANKRD34BA5PLL1 514 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 RBFOX3A6NFN3 312 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 BMPR1BO00238 502 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 HMGB3O15347 200 aaKnown RBP11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 PMS2P11Q13670 270 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 PATE2Q6UY27 113 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 IQCF2Q8IXL9 164 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 KLHDC1Q8N7A1 406 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 FAM210AQ96ND0 272 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 CHRDL1Q9BU40 450 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 SMDT1Q9H4I9 107 aa11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 MRPL27Q9P0M9 148 aaKnown RBP11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 PEF1Q9UBV8 284 aaKnown RBP11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 PUS1Q9Y606 427 aaKnown RBP eCLIP11.06□□□□□ -0.64
HMGA1P1-201ENST00000415560 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 NDUFA7O95182 113 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 IGHV3-11P01762 117 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 S100A1P23297 94 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 CCL20P78556 96 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 GUK1Q16774 197 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 SSX7Q7RTT5 188 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 OR5AU1Q8NGC0 362 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 TREM1Q9NP99 234 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 MANBALQ9NQG1 85 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 TMEM167BQ9NRX6 74 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 RABAC1Q9UI14 185 aa11.05□□□□□ -0.64
HMGA1P1-201ENST00000415560 CYSRT1A8MQ03 144 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 OR7C2O60412 319 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 GGCTO75223 188 aaKnown RBP11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 ATP6V1G1O75348 118 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 RPLP1P05386 114 aaKnown RBP11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 ADMP35318 185 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 OR4F5Q8NH21 305 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 GNG13Q9P2W3 67 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
HMGA1P1-201ENST00000415560 NDUFA4O00483 81 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 ARL14EPLP0DKL9 152 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 GCHFRP30047 84 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 FAM106AQ4KMX7 169 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 SPATA31B1PQ5VZV4 182 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 TOMM20LQ6UXN7 152 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
HMGA1P1-201ENST00000415560 NARS2Q96I59 477 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms