RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
USP4-203ENST00000415188 SVEP1Q4LDE5 3571 aa11.84□□□□□ -0.51
USP4-203ENST00000415188 A0A0U1RQK1 487 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 A0A1W2PPI3 338 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 ZNF320A2RRD8 509 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 HELTA6NFD8 242 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 GNG4P50150 75 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 HIST1H2BLQ99880 126 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 SRSF8Q9BRL6 282 aaKnown RBP11.83□□□□□ -0.52
USP4-203ENST00000415188 IGLC7A0M8Q6 106 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 E7EUB6 86 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 BUB1B-PAK6H3BSN5 160 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 NDUFS8O00217 210 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 ENSAO43768 121 aaKnown RBP11.83□□□□□ -0.52
USP4-203ENST00000415188 FABP4P15090 132 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 COL8A2P25067 703 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 YPEL3P61236 119 aaPredicted RBP11.83□□□□□ -0.52
USP4-203ENST00000415188 TIGITQ495A1 244 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 C10orf55Q5SWW7 151 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 C10orf113Q5VZT2 155 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 OR2T6Q8NHC8 308 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 TMEM37Q8WXS4 190 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 PACRGQ96M98 296 aaPredicted RBP11.83□□□□□ -0.52
USP4-203ENST00000415188 TRGV9Q99603 122 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 SLC25A2Q9BXI2 301 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 RAB1BQ9H0U4 201 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 FNDC4Q9H6D8 234 aaPredicted RBP11.83□□□□□ -0.52
USP4-203ENST00000415188 OSTCQ9NRP0 149 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 TRAPPC1Q9Y5R8 145 aa11.83□□□□□ -0.52
USP4-203ENST00000415188 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 IGHV1-3A0A0C4DH29 117 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 PGPEP1LA6NFU8 196 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 K7EN84 100 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
USP4-203ENST00000415188 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
USP4-203ENST00000415188 TAS2R60P59551 318 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 UBE2L3P68036 154 aaKnown RBP11.82□□□□□ -0.52
USP4-203ENST00000415188 MLANAQ16655 118 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 COX19Q49B96 90 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 CENPWQ5EE01 88 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 LY6G5BQ8NDX9 201 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 OR5R1Q8NH85 324 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 TMEM190Q8WZ59 177 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 AURKAIP1Q9NWT8 199 aaPredicted RBP11.82□□□□□ -0.52
USP4-203ENST00000415188 CDC42EP3Q9UKI2 254 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 INSIG2Q9Y5U4 225 aa11.82□□□□□ -0.52
USP4-203ENST00000415188 MXRA5Q9NR99 2828 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 IGKV1D-37A0A075B6S9 117 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 LIPFP07098 398 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 CRYBB3P26998 211 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 ZNF90Q03938 601 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 RPEL1Q2QD12 228 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 IL17RELQ6ZVW7 336 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 PAXXQ9BUH6 204 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 TMEM160Q9NX00 188 aa11.81□□□□□ -0.52
USP4-203ENST00000415188 LYNX1G3V0Z9 82 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 LY6LH3BQJ8 138 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 GCGP01275 180 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 LYNX1P0DP58 116 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 HIST1H1BP16401 226 aaKnown RBP11.8□□□□□ -0.52
USP4-203ENST00000415188 PDZD11Q5EBL8 140 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
USP4-203ENST00000415188 RPEQ96AT9 228 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
USP4-203ENST00000415188 STAB1Q9NY15 2570 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 LINC00587B1AMM8 73 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 ISLRO14498 428 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 AMBPP02760 352 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 LGALS4P56470 323 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 TNXAQ16473 311 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 IGF2BP2-AS1Q96M15 143 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 TNFRSF19Q9NS68 423 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 V9GYV3 84 aa11.79□□□□□ -0.52
USP4-203ENST00000415188 M0R1W7 72 aa11.78□□□□□ -0.52
USP4-203ENST00000415188 PLP1P60201 277 aa11.78□□□□□ -0.52
USP4-203ENST00000415188 ERVFC1-1P60608 527 aa11.78□□□□□ -0.52
USP4-203ENST00000415188 SUMO1P63165 101 aaKnown RBP11.78□□□□□ -0.52
USP4-203ENST00000415188 JOSD1Q15040 202 aaPredicted RBP11.78□□□□□ -0.52
USP4-203ENST00000415188 PPP1R27Q86WC6 154 aa11.78□□□□□ -0.52
USP4-203ENST00000415188 RITA1Q96K30 269 aa11.78□□□□□ -0.52
USP4-203ENST00000415188 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
USP4-203ENST00000415188 IGHV3-72A0A0B4J1Y9 119 aa11.77□□□□□ -0.52
USP4-203ENST00000415188 TGFAP01135 160 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms