RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 NAA60Q9H7X0 242 aa13.83□□□□□ -0.2
UBXN4-202ENST00000415164 HLA-DRB4X5D2U9 266 aa13.83□□□□□ -0.2
UBXN4-202ENST00000415164 PKD1P98161 4303 aa13.83□□□□□ -0.2
UBXN4-202ENST00000415164 TMEM189A5PLL7 270 aa13.82□□□□□ -0.2
UBXN4-202ENST00000415164 CDS2O95674 445 aa13.82□□□□□ -0.2
UBXN4-202ENST00000415164 NKX2-1P43699 371 aaPredicted RBP13.82□□□□□ -0.2
UBXN4-202ENST00000415164 COQ8AQ8NI60 647 aa13.82□□□□□ -0.2
UBXN4-202ENST00000415164 ABHD1Q96SE0 405 aa13.82□□□□□ -0.2
UBXN4-202ENST00000415164 RFNGQ9Y644 331 aa13.82□□□□□ -0.2
UBXN4-202ENST00000415164 PSG1P11464 419 aa13.81□□□□□ -0.2
UBXN4-202ENST00000415164 LGALS9BQ3B8N2 356 aa13.81□□□□□ -0.2
UBXN4-202ENST00000415164 GLYATL2Q8WU03 294 aa13.81□□□□□ -0.2
UBXN4-202ENST00000415164 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
UBXN4-202ENST00000415164 RNF125Q96EQ8 232 aa13.81□□□□□ -0.2
UBXN4-202ENST00000415164 C7orf50Q9BRJ6 194 aaKnown RBP13.81□□□□□ -0.2
UBXN4-202ENST00000415164 PLA2G2EQ9NZK7 142 aa13.81□□□□□ -0.2
UBXN4-202ENST00000415164 ABCA13Q86UQ4 5058 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 CD74P04233 296 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 ID1P41134 155 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 FAM222AQ5U5X8 452 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 ZNF705AQ6ZN79 300 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-202ENST00000415164 NOXA1Q86UR1 476 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 PPP1R14BQ96C90 147 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-202ENST00000415164 SEPSECSQ9HD40 501 aaKnown RBP13.8□□□□□ -0.2
UBXN4-202ENST00000415164 PRR13Q9NZ81 148 aa13.8□□□□□ -0.2
UBXN4-202ENST00000415164 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 ZNF705FA8MVS1 300 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-202ENST00000415164 DISC1C4P0D8 188 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 ZNF705DP0CH99 300 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-202ENST00000415164 ZNF705BP0CI00 300 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-202ENST00000415164 LYZP61626 148 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 AARDQ4LEZ3 155 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 GPR107Q5VW38 600 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 NEU1Q99519 415 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 NIPSNAP3BQ9BS92 247 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 SLC35B3Q9H1N7 401 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 PFDN2Q9UHV9 154 aa13.79□□□□□ -0.2
UBXN4-202ENST00000415164 SMIM9A6NGZ8 99 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 RGS5O15539 181 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 SULT1A3P0DMM9 295 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 SULT1A4P0DMN0 295 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 ZNF182P17025 639 aaPredicted RBP13.78□□□□□ -0.2
UBXN4-202ENST00000415164 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
UBXN4-202ENST00000415164 SOHLH1Q5JUK2 328 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 C15orf40Q8WUR7 153 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 WDR12Q9GZL7 423 aaKnown RBP13.78□□□□□ -0.2
UBXN4-202ENST00000415164 SAV1Q9H4B6 383 aaPredicted RBP13.78□□□□□ -0.2
UBXN4-202ENST00000415164 DKK2Q9UBU2 259 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
UBXN4-202ENST00000415164 HBE1P02100 147 aa13.77□□□□□ -0.21
UBXN4-202ENST00000415164 KLF9Q13886 244 aaPredicted RBP13.77□□□□□ -0.21
UBXN4-202ENST00000415164 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
UBXN4-202ENST00000415164 FOXI2Q6ZQN5 318 aa13.77□□□□□ -0.21
UBXN4-202ENST00000415164 ZNF575Q86XF7 245 aa13.77□□□□□ -0.21
UBXN4-202ENST00000415164 LGI3Q8N145 548 aa13.77□□□□□ -0.21
UBXN4-202ENST00000415164 NAA50Q9GZZ1 169 aaKnown RBP13.77□□□□□ -0.21
UBXN4-202ENST00000415164 TEX48A0A1B0GUV7 120 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 LOC102723971A0A1B0GUV8 181 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 F6UB75 175 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 GABARAPH6UMI1 98 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 GABARAPO95166 117 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 ZNF90Q03938 601 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 OR2F1Q13607 317 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 EBLN2Q6P2I7 272 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 DTD1Q8TEA8 209 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 SLC35E1Q96K37 410 aa13.76□□□□□ -0.21
UBXN4-202ENST00000415164 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
UBXN4-202ENST00000415164 PSMB3P49720 205 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 OR8G2PQ6IF36 304 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 OR4C16Q8NGL9 310 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 FAM210BQ96KR6 192 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 TMEM208Q9BTX3 173 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 RBKSQ9H477 322 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 YTHDF2Q9Y5A9 579 aaKnown RBP13.75□□□□□ -0.21
UBXN4-202ENST00000415164 U3KQ87 197 aa13.75□□□□□ -0.21
UBXN4-202ENST00000415164 DAD1P61803 113 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 SUPT4H1P63272 117 aaKnown RBP13.74□□□□□ -0.21
UBXN4-202ENST00000415164 PSG9Q00887 426 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 SURF2Q15527 256 aaPredicted RBP13.74□□□□□ -0.21
UBXN4-202ENST00000415164 C1orf134Q5TEV5 83 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 FAM78BQ5VT40 261 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 TMEM88Q6PEY1 159 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 MAGT1Q9H0U3 335 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 GPR132Q9UNW8 380 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 TMEM56-RWDD3S4R434 201 aa13.74□□□□□ -0.21
UBXN4-202ENST00000415164 AKAIN1P0CW23 69 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 RRN3P1Q2M238 152 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 CLVS1Q8IUQ0 354 aaPredicted RBP13.73□□□□□ -0.21
UBXN4-202ENST00000415164 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 OR51S1Q8NGJ8 323 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 CACFD1Q9UGQ2 172 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
UBXN4-202ENST00000415164 FABP1P07148 127 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 AKR1C4P17516 323 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 SSBP1Q04837 148 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms