RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
LIMS1-206ENST00000414829 E5RGE8 158 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 DEDDO75618 318 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 PSG1P11464 419 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
LIMS1-206ENST00000414829 CD81P60033 236 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 SELENOTP62341 195 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 BPIFCQ8NFQ6 507 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 ASB13Q8WXK3 278 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 B9D2Q9BPU9 175 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 SLC25A31Q9H0C2 315 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 SLC45A2Q9UMX9 530 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
LIMS1-206ENST00000414829 TRAV2A0A0B4J234 112 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 HELTA6NFD8 242 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 A8MZ25 164 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 EDN2P20800 178 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 AP2S1P53680 142 aaPredicted RBP11.02□□□□□ -0.65
LIMS1-206ENST00000414829 RAB31Q13636 194 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 TEPPQ6URK8 271 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 LILRB2Q8N423 598 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 FAM110AQ9BQ89 295 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 NEURL2Q9BR09 285 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 TUBA4BQ9H853 241 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 ALG5Q9Y673 324 aa11.02□□□□□ -0.65
LIMS1-206ENST00000414829 ZNF785A8K8V0 405 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 PMS2P5A8MQ11 134 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 S100A11P31949 105 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 P2RY1P47900 373 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 SULT1A1P50225 295 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 BAXQ07812 192 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 SLC38A11Q08AI6 406 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 TCF24Q7RTU0 167 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 ZNF546Q86UE3 836 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 ST8SIA2Q92186 375 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 RNF2Q99496 336 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 PBDC1Q9BVG4 233 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 MED28Q9H204 178 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
LIMS1-206ENST00000414829 IGKV1D-37A0A075B6S9 117 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
LIMS1-206ENST00000414829 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 H2BFSP57053 126 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 LYZP61626 148 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 RRAS2P62070 204 aaPredicted RBP11□□□□□ -0.65
LIMS1-206ENST00000414829 RPL11P62913 178 aaKnown RBP11□□□□□ -0.65
LIMS1-206ENST00000414829 ZNF90Q03938 601 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 USF2Q15853 346 aaPredicted RBP11□□□□□ -0.65
LIMS1-206ENST00000414829 ATP6V1FQ16864 119 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 LRRC37A5PQ49AS3 106 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 C1orf194Q5T5A4 169 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 PPP1R1CQ8WVI7 109 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 C11orf1Q9H5F2 150 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
LIMS1-206ENST00000414829 IGHV3-49A0A0A0MS15 119 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
LIMS1-206ENST00000414829 SIX6O95475 246 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 OXA1LQ15070 435 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 PXDC1Q5TGL8 231 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 SAMD13Q5VXD3 122 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 CYP2G1PQ6ZSU1 146 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 Q8N1Y9 231 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 TMEM252Q8N6L7 170 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 PPP1R14BQ96C90 147 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 DNAH3Q8TD57 4116 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 SORL1Q92673 2214 aa10.99□□□□□ -0.65
LIMS1-206ENST00000414829 IGKV1OR2-108A0A075B7D4 117 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 DFFBO76075 338 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 CST7O76096 145 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 FGL1Q08830 312 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 FAM90A2PQ658T7 463 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 TMEM217Q8N7C4 229 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 U3KQE9 123 aa10.98□□□□□ -0.65
LIMS1-206ENST00000414829 IGHV3OR16-13A0A075B7E8 117 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 IGHV3-74A0A0B4J1X5 117 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 MPDU1O75352 247 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 CCNKO75909 580 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 MPC2O95563 127 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 CD7P09564 240 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 RAP2BP61225 183 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 OR2F1Q13607 317 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 GLMPQ8WWB7 406 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 GPR82Q96P67 336 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 KCNIP2Q9NS61 270 aa10.97□□□□□ -0.65
LIMS1-206ENST00000414829 PRKDCP78527 4128 aaKnown RBP10.96□□□□□ -0.65
LIMS1-206ENST00000414829 IGHV3-66A0A0C4DH42 116 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 IGSF23A1L1A6 192 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 BUB3O43684 328 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 LINC00869P0C866 280 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 VWC2Q2TAL6 325 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 SIGLEC15Q6ZMC9 328 aa10.96□□□□□ -0.65
LIMS1-206ENST00000414829 THAP6Q8TBB0 222 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 272.3 ms