RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 NCOR1O75376 2440 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 ANKRD36A6QL64 1941 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 GAGE12BA1L429 117 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 GAGE7O76087 117 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 GAGE12FP0CL80 117 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 GAGE12GP0CL81 117 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 GAGE12IP0CL82 117 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 ZMAT4Q9H898 229 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 IGKV1OR2-108A0A075B7D4 117 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 SERF1AO75920 110 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 SHANK3Q9BYB0 1731 aa15.29■□□□□ 0.04
SHANK3-202ENST00000414786 UPK2O00526 184 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 ORMDL2Q53FV1 153 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 CSTL1Q9H114 145 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A10PA6NDY2 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A18PA6NE21 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A16PA6NEW6 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A20PA6NIJ5 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A8PA6NJQ4 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A7PA6NKC0 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A22PA8MWA6 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A12PA8MX19 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A5PA8MXJ8 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A23PA8MXZ1 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 CD5LO43866 347 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A15PP0C7V4 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A13PP0C7W8 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A14PP0C7W9 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 FAM90A24PP0C7X0 464 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 RNF114Q9Y508 228 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 SMDT1Q9H4I9 107 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 MESP1Q9BRJ9 268 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 A0A0J9YY99 117 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 TBX6O95947 436 aaPredicted RBP15.28■□□□□ 0.04
SHANK3-202ENST00000414786 TAL2Q16559 108 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 PLAC1Q9HBJ0 212 aa15.28■□□□□ 0.04
SHANK3-202ENST00000414786 IGHV2-26A0A0B4J1V2 119 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 LEPROTO15243 131 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 PIN1P1O15428 100 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 BPESC1Q9GZL8 116 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 UCP1P25874 307 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 GAGE6Q13070 117 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 LAGE3Q14657 143 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 MORN2Q502X0 79 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 PRIMA1Q86XR5 153 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 TMEM256Q8N2U0 113 aa15.27■□□□□ 0.04
SHANK3-202ENST00000414786 IGHV1-46P01743 117 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 ZNF708P17019 499 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 COX5BP10606 129 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 KLF12Q9Y4X4 402 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 A8MWV9 139 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 C5orf47Q569G3 176 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 RIPPLY2Q5TAB7 128 aa15.27■□□□□ 0.03
SHANK3-202ENST00000414786 IFITM3Q01628 133 aa15.26■□□□□ 0.03
SHANK3-202ENST00000414786 ATP6V0BQ99437 205 aa15.26■□□□□ 0.03
SHANK3-202ENST00000414786 TIMM17AQ99595 171 aa15.26■□□□□ 0.03
SHANK3-202ENST00000414786 RS1O15537 224 aa15.26■□□□□ 0.03
SHANK3-202ENST00000414786 TMEM200BQ69YZ2 307 aa15.26■□□□□ 0.03
SHANK3-202ENST00000414786 LINC00518Q8N0U6 118 aa15.26■□□□□ 0.03
SHANK3-202ENST00000414786 D6R8Y8 96 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 C2orf82Q6UX34 121 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 B4DSR2 109 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 TPTE2P1Q5T6R2 138 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 TEX38Q6PEX7 206 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
SHANK3-202ENST00000414786 PSG1P11464 419 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 RASL10AQ92737 203 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 IGF2BP2-AS1Q96M15 143 aa15.25■□□□□ 0.03
SHANK3-202ENST00000414786 PMVKQ15126 192 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 NRN1Q9NPD7 142 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 A6NNC1 897 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 OVOL1O14753 267 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 SPTA1P02549 2419 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 IRF3Q14653 427 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 ZNF319Q9P2F9 582 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 SPINK13Q1W4C9 94 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 IQCF6A8MYZ5 107 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 PRCDQ00LT1 54 aa15.24■□□□□ 0.03
SHANK3-202ENST00000414786 IGKV2D-24A0A075B6R9 120 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 SDK2Q58EX2 2172 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 SPATA31B1PQ5VZV4 182 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 LINC01356Q8N9X3 169 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 TRAV12-2A0A075B6T6 113 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 IGKV1D-13A0A0B4J2D9 117 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 IGHV4-28A0A0C4DH34 117 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 IGKV1-13P0DP09 117 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 TMEM144Q7Z5S9 345 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 BMPERQ8N8U9 685 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 EFNA4P52798 201 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 RNF166Q96A37 237 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-202ENST00000414786 C5orf30Q96GV9 206 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 UCP3P55916 312 aa15.23■□□□□ 0.03
SHANK3-202ENST00000414786 PRR30Q53SZ7 412 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-202ENST00000414786 MED12Q93074 2177 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 COL8A2P25067 703 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 TMEM30BQ3MIR4 351 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 IGKV1-5P01602 117 aa15.22■□□□□ 0.03
SHANK3-202ENST00000414786 CACNG8Q8WXS5 425 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms