RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
ACTB-202ENST00000414620 KLF9Q13886 244 aaPredicted RBP11.28□□□□□ -0.6
ACTB-202ENST00000414620 PYDC2Q56P42 97 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 GSG1LQ6UXU4 331 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 C2CD4CQ8TF44 421 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 TRIM63Q969Q1 353 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 CACFD1Q9UGQ2 172 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 PAIP2BQ9ULR5 123 aaKnown RBP11.28□□□□□ -0.6
ACTB-202ENST00000414620 U3KQ87 197 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 X6R8D5 127 aa11.28□□□□□ -0.6
ACTB-202ENST00000414620 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
ACTB-202ENST00000414620 FAUP35544 74 aaKnown RBP11.27□□□□□ -0.61
ACTB-202ENST00000414620 SRPXP78539 464 aa11.27□□□□□ -0.61
ACTB-202ENST00000414620 ZNF90Q03938 601 aa11.27□□□□□ -0.61
ACTB-202ENST00000414620 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
ACTB-202ENST00000414620 TOMM5Q8N4H5 51 aa11.27□□□□□ -0.61
ACTB-202ENST00000414620 NRN1Q9NPD7 142 aa11.27□□□□□ -0.61
ACTB-202ENST00000414620 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 IGKV1D-37A0A075B6S9 117 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
ACTB-202ENST00000414620 CCDC160A6NGH7 325 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
ACTB-202ENST00000414620 IGLL5B9A064 214 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 MIFP14174 115 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 VAMP1P23763 118 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 DEFB1P60022 68 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 LYZP61626 148 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
ACTB-202ENST00000414620 OR2F1Q13607 317 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 TBC1D24Q9ULP9 559 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 V9GYH0 126 aa11.26□□□□□ -0.61
ACTB-202ENST00000414620 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 GAMTQ14353 236 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 ZNF79Q15937 498 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 Q6ZTC4 211 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 CSNK1G2-AS1Q8NCQ2 148 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 XCL2Q9UBD3 114 aa11.25□□□□□ -0.61
ACTB-202ENST00000414620 DUXBA0A1W2PPF3 345 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 PITX3O75364 302 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 FXYD7P58549 80 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 AP3S2P59780 193 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 PRR20EP86478 221 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 PRR20CP86479 221 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 PRR20DP86480 221 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 PRR20BP86481 221 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 PRR20AP86496 221 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 TMEM128Q5BJH2 165 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 CELA1Q9UNI1 258 aa11.24□□□□□ -0.61
ACTB-202ENST00000414620 H3BMM0 161 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 GPX4P36969 197 aaPredicted RBP11.23□□□□□ -0.61
ACTB-202ENST00000414620 PPP1R1AQ13522 171 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 OR8G2PQ6IF36 304 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 WDR12Q9GZL7 423 aaKnown RBP11.23□□□□□ -0.61
ACTB-202ENST00000414620 MAGT1Q9H0U3 335 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 HRH4Q9H3N8 390 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
ACTB-202ENST00000414620 C11orf94C9JXX5 98 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 SFT2D2O95562 160 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 HOXB5P09067 269 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 S100A5P33763 92 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 NUP62P37198 522 aaPredicted RBP11.22□□□□□ -0.61
ACTB-202ENST00000414620 RAB11AP62491 216 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
ACTB-202ENST00000414620 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 WRBO00258 174 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
ACTB-202ENST00000414620 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
ACTB-202ENST00000414620 CENPSQ8N2Z9 138 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 LRTM2Q8N967 370 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 COQ8AQ8NI60 647 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 TRGV9Q99603 122 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
ACTB-202ENST00000414620 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.61
ACTB-202ENST00000414620 IGKV1OR2-108A0A075B7D4 117 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 PIGBOS1A0A0B4J2F0 54 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 SNRPGP15A8MWD9 76 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 H3BP45 60 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 MED6O75586 246 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 FABP1P07148 127 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
ACTB-202ENST00000414620 SLC25A21Q9BQT8 299 aaPredicted RBP11.2□□□□□ -0.62
ACTB-202ENST00000414620 PFDN2Q9UHV9 154 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 TMED3Q9Y3Q3 217 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 FRAS1Q86XX4 4008 aa11.2□□□□□ -0.62
ACTB-202ENST00000414620 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 SOCS3O14543 225 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 SYNGR2O43760 224 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 SLC25A6P12236 298 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 ID1P41134 155 aa11.19□□□□□ -0.62
ACTB-202ENST00000414620 TCTAP57738 103 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms