RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 SMIM7Q9BQ49 75 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 PAXXQ9BUH6 204 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 OR51M1Q9H341 326 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 NAT8Q9UHE5 227 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 ZNF580Q9UK33 172 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 LINC01548A6NM66 108 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 IER3P46695 156 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 ATP5G3P48201 142 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 TUBA4BQ9H853 241 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 MRPL27Q9P0M9 148 aaKnown RBP11.51□□□□□ -0.57
RBBP4-204ENST00000414241 RNF24Q9Y225 148 aa11.51□□□□□ -0.57
RBBP4-204ENST00000414241 YTHDF2Q9Y5A9 579 aaKnown RBP11.51□□□□□ -0.57
RBBP4-204ENST00000414241 A0A087WWC5 75 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 G3V318 75 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 H3BUA1 57 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 OR2C1O95371 312 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 S100A7P31151 101 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 LYZP61626 148 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
RBBP4-204ENST00000414241 RHOGP84095 191 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 PARLQ9H300 379 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 SDF2L1Q9HCN8 221 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 PTPN13Q12923 2485 aa11.5□□□□□ -0.57
RBBP4-204ENST00000414241 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 WI2-2373I1.2A0A1W2PRP0 233 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
RBBP4-204ENST00000414241 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
RBBP4-204ENST00000414241 NUPL2O15504 423 aaKnown RBP11.49□□□□□ -0.57
RBBP4-204ENST00000414241 C15orf32Q32M92 178 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 C9orf152Q5JTZ5 239 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
RBBP4-204ENST00000414241 ZNF502Q8TBZ5 544 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 C11orf52Q96A22 123 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
RBBP4-204ENST00000414241 C20orf24Q9BUV8 137 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 PLXNB1O43157 2135 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 NAV2Q8IVL1 2488 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 AP4M1O00189 453 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 ZNF674Q2M3X9 581 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 Q6YL49 198 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 ZNF491Q8N8L2 437 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
RBBP4-204ENST00000414241 WFDC11Q8NEX6 87 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 TCEAL7Q9BRU2 100 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 TMEM14CQ9P0S9 112 aa11.49□□□□□ -0.57
RBBP4-204ENST00000414241 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
RBBP4-204ENST00000414241 MDFIC2A0A1B0GVS7 189 aa11.48□□□□□ -0.57
RBBP4-204ENST00000414241 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
RBBP4-204ENST00000414241 CTSGP08311 255 aa11.48□□□□□ -0.57
RBBP4-204ENST00000414241 OR10J4P0C629 311 aa11.48□□□□□ -0.57
RBBP4-204ENST00000414241 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
RBBP4-204ENST00000414241 SLC25A39Q9BZJ4 359 aaPredicted RBP11.48□□□□□ -0.57
RBBP4-204ENST00000414241 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
RBBP4-204ENST00000414241 NDUFB4O95168 129 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 IL4P05112 153 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 NPPCP23582 126 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 KIAA0141Q14154 515 aaPredicted RBP11.47□□□□□ -0.57
RBBP4-204ENST00000414241 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 FXYD5Q96DB9 178 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 SHANK2-AS3Q9BTD1 123 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 CRYBG3Q68DQ2 2970 aa11.47□□□□□ -0.57
RBBP4-204ENST00000414241 ASH1LQ9NR48 2969 aaKnown RBP11.47□□□□□ -0.57
RBBP4-204ENST00000414241 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 BLCAPP62952 87 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 USMG5Q96IX5 58 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 S4R3C0 116 aa11.46□□□□□ -0.57
RBBP4-204ENST00000414241 OR2T8A6NH00 312 aa11.46□□□□□ -0.58
RBBP4-204ENST00000414241 PYYP10082 97 aa11.46□□□□□ -0.58
RBBP4-204ENST00000414241 PPIFP30405 207 aaKnown RBP11.46□□□□□ -0.58
RBBP4-204ENST00000414241 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.58
RBBP4-204ENST00000414241 C15orf54Q8N8G6 183 aa11.46□□□□□ -0.58
RBBP4-204ENST00000414241 CTDSP1Q9GZU7 261 aa11.46□□□□□ -0.58
RBBP4-204ENST00000414241 TENM4Q6N022 2769 aa11.45□□□□□ -0.58
RBBP4-204ENST00000414241 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
RBBP4-204ENST00000414241 H3BRN7 92 aa11.45□□□□□ -0.58
RBBP4-204ENST00000414241 CLEC3BP05452 202 aa11.45□□□□□ -0.58
RBBP4-204ENST00000414241 NBEAP1P0C6P0 100 aa11.45□□□□□ -0.58
RBBP4-204ENST00000414241 SUMO1P63165 101 aaKnown RBP11.45□□□□□ -0.58
RBBP4-204ENST00000414241 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
RBBP4-204ENST00000414241 CELSR2Q9HCU4 2923 aa11.44□□□□□ -0.58
RBBP4-204ENST00000414241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.581e-7■■■■■ 54.7
RBBP4-204ENST00000414241 GGTLC3B5MD39 225 aa11.44□□□□□ -0.58
RBBP4-204ENST00000414241 TSPAN4O14817 238 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms