RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 C9orf139Q6ZV77 190 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 SAP30O75446 220 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 APOHP02749 345 aaPredicted RBP14.15□□□□□ -0.14
PHRF1-202ENST00000413872 FHL1Q13642 323 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 DNLZQ5SXM8 178 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 LYPD2Q6UXB3 125 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 OR5AN1Q8NGI8 311 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 GPR61Q9BZJ8 451 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 TMEM170BQ5T4T1 132 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 IGF2-ASQ6U949 168 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 A8MXK9 166 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 UBE2E1P51965 193 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 GNG5P63218 68 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 TMEM183AQ8IXX5 376 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 C11orf44Q8N8P7 122 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 DOPEY2Q9Y3R5 2298 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 F2Z2F3 143 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 PSG1P11464 419 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 MUC21Q5SSG8 566 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 PTPRDP23468 1912 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 IGKV1-5P01602 117 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 SAA4P35542 130 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 SUPT4H1P63272 117 aaKnown RBP14.14□□□□□ -0.15
PHRF1-202ENST00000413872 OR10J3Q5JRS4 329 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 TMEM14EPQ6UXP3 125 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 NLRC5Q86WI3 1866 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 WDR81Q562E7 1941 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 STAG3L3P0CL85 134 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 DTX2Q86UW9 622 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 GLMPQ8WWB7 406 aa14.14□□□□□ -0.15
PHRF1-202ENST00000413872 ZNF256Q9Y2P7 627 aaPredicted RBP14.14□□□□□ -0.15
PHRF1-202ENST00000413872 SPTAN1Q13813 2472 aaKnown RBP14.14□□□□□ -0.15
PHRF1-202ENST00000413872 GBF1Q92538 1859 aa14.13□□□□□ -0.15
PHRF1-202ENST00000413872 LMO1P25800 156 aa14.13□□□□□ -0.15
PHRF1-202ENST00000413872 ST20Q9HBF5 79 aa14.13□□□□□ -0.15
PHRF1-202ENST00000413872 Q5PR19 223 aa14.13□□□□□ -0.15
PHRF1-202ENST00000413872 FABP2P12104 132 aa14.13□□□□□ -0.15
PHRF1-202ENST00000413872 CFPP27918 469 aa14.13□□□□□ -0.15
PHRF1-202ENST00000413872 RNF166Q96A37 237 aaPredicted RBP14.13□□□□□ -0.15
PHRF1-202ENST00000413872 LINC01549A6NIU2 74 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 TMEM50AO95807 157 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 TCF23Q7RTU1 214 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 PLXNA4Q9HCM2 1894 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 FNDC10F2Z333 226 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 SLC25A39Q9BZJ4 359 aaPredicted RBP14.12□□□□□ -0.15
PHRF1-202ENST00000413872 LOC107984156A0A0G2JMH3 177 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 ARL17AQ8IVW1 177 aa14.12□□□□□ -0.15
PHRF1-202ENST00000413872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.11□□□□□ -0.15
PHRF1-202ENST00000413872 FGF16O43320 207 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 TRGV4A0A0C4DH28 118 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 TMEM160Q9NX00 188 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 LINC00473A8K010 186 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 TRAV1-1A0A0B4J248 108 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 RNF223E7ERA6 249 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 LY6HO94772 140 aa14.11□□□□□ -0.15
PHRF1-202ENST00000413872 H7C2G1 150 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 J3QLI3 93 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 RPRMLQ8N4K4 120 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 HINT1P49773 126 aaPredicted RBP14.1□□□□□ -0.15
PHRF1-202ENST00000413872 MRAP2Q96G30 205 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 IGLV1-44P01699 117 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 HOXA5P20719 270 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 FBLN7Q53RD9 439 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 SMIM12Q96EX1 92 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 C1QTNF4Q9BXJ3 329 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 MUC21A0A0G2JKD1 596 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 MUC21A0A140T8X8 626 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 UQCRFS1P47985 274 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 WFDC1Q9HC57 220 aa14.1□□□□□ -0.15
PHRF1-202ENST00000413872 NXT2Q9NPJ8 142 aaKnown RBP14.1□□□□□ -0.15
PHRF1-202ENST00000413872 PMS2P5A8MQ11 134 aa14.09□□□□□ -0.15
PHRF1-202ENST00000413872 IFI27P40305 119 aaPredicted RBP14.09□□□□□ -0.15
PHRF1-202ENST00000413872 LYPD1Q8N2G4 141 aa14.09□□□□□ -0.15
PHRF1-202ENST00000413872 C18orf15Q96N68 181 aa14.09□□□□□ -0.15
PHRF1-202ENST00000413872 RNASE7Q9H1E1 156 aaKnown RBP14.09□□□□□ -0.15
PHRF1-202ENST00000413872 PKDREJQ9NTG1 2253 aa14.09□□□□□ -0.15
PHRF1-202ENST00000413872 CFAP161Q6P656 301 aa14.09□□□□□ -0.15
PHRF1-202ENST00000413872 ZNF562Q6V9R5 426 aa14.09□□□□□ -0.15
PHRF1-202ENST00000413872 KLHL30-AS1Q8NEE0 82 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 LINC00477Q96M19 166 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 TRAV3A0A0B4J244 114 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 FAM215AQ9Y5M1 114 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 KIAA1671Q9BY89 1806 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 IGHV1-69DA0A0B4J2H0 117 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 IGHV1-69P01742 117 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 PEF1Q9UBV8 284 aaKnown RBP14.08□□□□□ -0.16
PHRF1-202ENST00000413872 TOMM40O96008 361 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 TCF15Q12870 199 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 GCSAMLQ5JQS6 135 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 ATP5L2Q7Z4Y8 100 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 TSKUQ8WUA8 353 aa14.08□□□□□ -0.16
PHRF1-202ENST00000413872 ORMDL2Q53FV1 153 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 CFHR2P36980 270 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 FOXC2Q99958 501 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 IGHV2-70DA0A0C4DH43 119 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 IMMP2LQ96T52 175 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 IGLV3-9A0A075B6K5 115 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 ZNF138P52744 262 aa14.07□□□□□ -0.16
PHRF1-202ENST00000413872 RNF144BQ7Z419 303 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms