RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ORAOV1Q8WV07 137 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 H1FXQ92522 213 aaKnown RBP11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 MUC21A0A0G2JKD1 596 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 MUC21A0A140T8X8 626 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 SLC25A17O43808 307 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 IGHV1-46P01743 117 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 FAM27E3Q08E93 113 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 MUC21Q5SSG8 566 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 OR4C5Q8NGB2 326 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 ZNF835Q9Y2P0 537 aa11.74□□□□□ -0.53
SEMA3F-202ENST00000413852 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 A0A087X0K7 114 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 CRYABP02511 175 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 CNTFRP26992 372 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 PNKDQ8N490 385 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 C7orf69Q9H7B7 122 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 ZNF430Q9H8G1 570 aaPredicted RBP11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 FSTL3O95633 263 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 TMEM177Q53S58 311 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 SLC25A48Q6ZT89 311 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 PLSCR4Q9NRQ2 329 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 RNF7Q9UBF6 113 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 RPUSD1Q9UJJ7 312 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 DLL1O00548 723 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 ZNF596Q8TC21 504 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 NAA38Q9BRA0 125 aaKnown RBP11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 TMEM70Q9BUB7 260 aa11.73□□□□□ -0.53
SEMA3F-202ENST00000413852 PRR33A8MZF0 331 aa11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 MRPL27Q9P0M9 148 aaKnown RBP11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 PSG1P11464 419 aa11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 MUC15Q8N387 334 aa11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
SEMA3F-202ENST00000413852 IGHG3P01860 377 aa11.71□□□□□ -0.53
SEMA3F-202ENST00000413852 PDPNQ86YL7 162 aa11.71□□□□□ -0.53
SEMA3F-202ENST00000413852 OR1L8Q8NGR8 309 aa11.71□□□□□ -0.53
SEMA3F-202ENST00000413852 MRPS16Q9Y3D3 137 aaKnown RBP11.71□□□□□ -0.53
SEMA3F-202ENST00000413852 hADV38S2A0JD32 116 aa11.71□□□□□ -0.53
SEMA3F-202ENST00000413852 LYPD2Q6UXB3 125 aa11.71□□□□□ -0.53
SEMA3F-202ENST00000413852 FAM106CPP0CH98 169 aa11.71□□□□□ -0.54
SEMA3F-202ENST00000413852 TNFSF4P23510 183 aa11.71□□□□□ -0.54
SEMA3F-202ENST00000413852 POU2AF1Q16633 256 aa11.71□□□□□ -0.54
SEMA3F-202ENST00000413852 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.54
SEMA3F-202ENST00000413852 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.54
SEMA3F-202ENST00000413852 A0A1W2PPI3 338 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 S4R3C0 116 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 TCRBV4S1A1TA0A5B7 111 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 ADTRPQ96IZ2 230 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
SEMA3F-202ENST00000413852 SYS1-DBNDD2H3BUS1 97 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 TAX1BP3O14907 124 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 LEPROTL1O95214 131 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 HBBP68871 147 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 OR10X1Q8NGY0 326 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 IGHV1-69-2A0A0G2JMI3 117 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 NCR2O95944 276 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 TOMM40O96008 361 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 KLF5Q13887 457 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 LDLRAD2Q5SZI1 272 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 ZNF788Q6ZQV5 615 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 PRNTQ86SH4 94 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 WIPF2Q8TF74 440 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 RPP21Q9H633 154 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 TMEM200BQ69YZ2 307 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 MRPL32Q9BYC8 188 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-202ENST00000413852 P01737 135 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 UQCRFS1P47985 274 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 CCL17Q92583 94 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 APOA2P02652 100 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 CFHR2P36980 270 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 MZT1Q08AG7 82 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 COX19Q49B96 90 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 SARAFQ96BY9 339 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 GUCD1Q96NT3 240 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 SH3BGRL2Q9UJC5 107 aa11.68□□□□□ -0.54
SEMA3F-202ENST00000413852 IGHV2-70DA0A0C4DH43 119 aa11.67□□□□□ -0.54
SEMA3F-202ENST00000413852 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
SEMA3F-202ENST00000413852 GLRXP35754 106 aa11.67□□□□□ -0.54
SEMA3F-202ENST00000413852 FAM231DQ6ZW35 169 aa11.67□□□□□ -0.54
SEMA3F-202ENST00000413852 Q9H3A6 140 aa11.67□□□□□ -0.54
SEMA3F-202ENST00000413852 ANKRD11Q6UB99 2663 aaPredicted RBP11.67□□□□□ -0.54
SEMA3F-202ENST00000413852 OR2J3O76001 311 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms