RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 DUSP18Q8NEJ0 188 aa6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 SLC24A4Q8NFF2 622 aa6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 OR4X1Q8NH49 305 aa6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 RBKSQ9H477 322 aa6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 ENY2Q9NPA8 101 aa6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 GAR1Q9NY12 217 aaKnown RBP6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
HERPUD2-203ENST00000413517 IGHV3-66A0A0C4DH42 116 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 USP17L23D6RBM5 183 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 CORTO00230 105 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 PLA2G10O15496 165 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 SFT2D2O95562 160 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 IL7P13232 177 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 NPY1RP25929 384 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 HTR2BP41595 481 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 SUB1P53999 127 aaKnown RBP eCLIP6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 CENPSQ8N2Z9 138 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 LRTM2Q8N967 370 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 DEDD2Q8WXF8 326 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 VSIRQ9H7M9 311 aa6.33□□□□□ -1.4
HERPUD2-203ENST00000413517 IGKV3-7A0A075B6H7 116 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 TRAV14DV4A0A0A6YYC5 116 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 DUXBA0A1W2PPF3 345 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 MPTX1A8MV57 137 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 NDUFB6O95139 128 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 IAPPP10997 89 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 SRPXP78539 464 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 TRIQKQ629K1 86 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 FAM24BQ8N5W8 94 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 OR1S1Q8NH92 325 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 MUC7Q8TAX7 377 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 DTD1Q8TEA8 209 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 MGAT4CQ9UBM8 478 aa6.32□□□□□ -1.4
HERPUD2-203ENST00000413517 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 IGKV1D-37A0A075B6S9 117 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 C9orf170A2RU37 121 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 NAP1L6A6NFF2 107 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 ADAP1O75689 374 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 DFFBO76075 338 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 IFNA10P01566 189 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 MBPP02686 304 aaPredicted RBP6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 HOXB5P09067 269 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 ANXA3P12429 323 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 ANXA7P20073 488 aaKnown RBP6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 CRYBB3P26998 211 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 OR10J1P30954 320 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 TFPI2P48307 235 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 DHRS2Q13268 280 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 CASC10Q5T4H9 136 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 GGNBP1Q5YKI7 109 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 APRG1Q8IVJ8 170 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 GINS3Q9BRX5 216 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 GGTLC1Q9BX51 225 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 MAGT1Q9H0U3 335 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
HERPUD2-203ENST00000413517 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 RPS10-NUDT3A0A1W2PQS6 291 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 PRSS46E5RG02 174 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 SLC25A4P12235 298 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 SLC25A6P12236 298 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 UBE2MP61081 183 aaKnown RBP6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 YPEL3P61236 119 aaPredicted RBP6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 USF2Q15853 346 aaPredicted RBP6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 LAMTOR1Q6IAA8 161 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 OR1S2Q8NGQ3 325 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 ACY3Q96HD9 319 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 OVOL2Q9BRP0 275 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 U3KQ87 197 aa6.3□□□□□ -1.4
HERPUD2-203ENST00000413517 TRGV11A0A075B6L2 103 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 IGKV1OR2-108A0A075B7D4 117 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 TRAV30A0A087WSZ9 112 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 OR4E1P0C645 316 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 P2RY1P47900 373 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 INPP1P49441 399 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 GAMTQ14353 236 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 LYG2Q86SG7 212 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 MS4A6AQ9H2W1 248 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 TMED3Q9Y3Q3 217 aa6.29□□□□□ -1.4
HERPUD2-203ENST00000413517 FAM90A26D6RGX4 464 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 H3BP45 60 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 K7EQG2 157 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 WRBO00258 174 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 LYRM1O43325 122 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 SYNGR2O43760 224 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 CCNKO75909 580 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 TOMM40O96008 361 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 IFNA4P05014 189 aa6.28□□□□□ -1.4
HERPUD2-203ENST00000413517 IL4P05112 153 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms