RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
MCF2L-211ENST00000413354 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
MCF2L-211ENST00000413354 CSTL1Q9H114 145 aa11.59□□□□□ -0.55
MCF2L-211ENST00000413354 WRBO00258 174 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 LYRM1O43325 122 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 ZNF124Q15973 351 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 LINC00299Q6ZSB3 139 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 RNF183Q96D59 192 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 CCDC32Q9BV29 185 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
MCF2L-211ENST00000413354 AGRNO00468 2067 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 ADAP1O75689 374 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 ANXA7P20073 488 aaKnown RBP11.57□□□□□ -0.56
MCF2L-211ENST00000413354 STHQ8IWL8 128 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 GATAD1Q8WUU5 269 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 TRGV9Q99603 122 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 C20orf85Q9H1P6 137 aa11.57□□□□□ -0.56
MCF2L-211ENST00000413354 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
MCF2L-211ENST00000413354 IGKV1D-37A0A075B6S9 117 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-211ENST00000413354 NKX2-1P43699 371 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-211ENST00000413354 SPANXN5Q5MJ07 72 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 TMEM217Q8N7C4 229 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 THAP8Q8NA92 274 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 PBDC1Q9BVG4 233 aa11.56□□□□□ -0.56
MCF2L-211ENST00000413354 SEPSECSQ9HD40 501 aaKnown RBP11.56□□□□□ -0.56
MCF2L-211ENST00000413354 BUB3O43684 328 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 ZNF688P0C7X2 276 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 ATF4P18848 351 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-211ENST00000413354 LYZP61626 148 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
MCF2L-211ENST00000413354 ID3Q02535 119 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 ZNF90Q03938 601 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 OR4D5Q8NGN0 318 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 MITD1Q8WV92 249 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 S100ZQ8WXG8 99 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 NRN1Q9NPD7 142 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
MCF2L-211ENST00000413354 A0A0J9YWU9 116 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 H3BP45 60 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 PLA2G10O15496 165 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 CA1P00915 261 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-211ENST00000413354 S100A7P31151 101 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 POLR2GP62487 172 aaKnown RBP eCLIP11.54□□□□□ -0.56
MCF2L-211ENST00000413354 AKR1C1Q04828 323 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 IAH1Q2TAA2 248 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-211ENST00000413354 TMEM41BQ5BJD5 291 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
MCF2L-211ENST00000413354 DYNC2H1Q8NCM8 4307 aaKnown RBP11.54□□□□□ -0.56
MCF2L-211ENST00000413354 LCE6AA0A183 80 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 SSSCA1O60232 199 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 TCRBP04435 133 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 SPP1P10451 314 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 MORN3Q6PF18 240 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-211ENST00000413354 ACOT7LQ6ZUV0 252 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 PPP1R14BQ96C90 147 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 CSMD3Q7Z407 3707 aa11.53□□□□□ -0.56
MCF2L-211ENST00000413354 SCGB1D2O95969 90 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 OR2F1Q13607 317 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 PSMG4Q5JS54 123 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.57
MCF2L-211ENST00000413354 ZBTB8BQ8NAP8 495 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-211ENST00000413354 BPIFCQ8NFQ6 507 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 SMIM8Q96KF7 97 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 RARRES2Q99969 163 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 NUDT15Q9NV35 164 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 SLC45A2Q9UMX9 530 aa11.52□□□□□ -0.57
MCF2L-211ENST00000413354 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 JTBO76095 146 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 TAS2R30P59541 319 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 ZNF846Q147U1 533 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 MZT2BQ6NZ67 158 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
MCF2L-211ENST00000413354 TENM2Q9NT68 2774 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 TRAV6A0A075B6T7 132 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 FAM240BA0A1B0GVZ2 78 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 SMCO3A2RU48 225 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 TSC22D2O75157 780 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 ID1P41134 155 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 OR11H2Q8NH07 326 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 ZNF431Q8TF32 576 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-211ENST00000413354 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
MCF2L-211ENST00000413354 C11orf68Q9H3H3 251 aaKnown RBP11.5□□□□□ -0.57
MCF2L-211ENST00000413354 GSKIPQ9P0R6 139 aa11.5□□□□□ -0.57
MCF2L-211ENST00000413354 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
MCF2L-211ENST00000413354 FNDC10F2Z333 226 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms