RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 TRGV3P03979 118 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 HSPB1P04792 205 aaKnown RBP7.82□□□□□ -1.16
LINC01643-201ENST00000412218 SAA1P0DJI8 122 aaPredicted RBP7.82□□□□□ -1.16
LINC01643-201ENST00000412218 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
LINC01643-201ENST00000412218 ELLP55199 621 aaPredicted RBP7.82□□□□□ -1.16
LINC01643-201ENST00000412218 GUCA2BQ16661 112 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 MRGPRG-AS1Q2M3A8 158 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
LINC01643-201ENST00000412218 VMA21Q3ZAQ7 101 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 ZNF506Q5JVG8 444 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 TMEM167AQ8TBQ9 72 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 SCRT1Q9BWW7 348 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 NPCDR1Q9BY65 106 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 RPRMQ9NS64 109 aa7.82□□□□□ -1.16
LINC01643-201ENST00000412218 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
LINC01643-201ENST00000412218 CTXND1A0A1B0GTU2 59 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 MAP1LC3B2A6NCE7 125 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 INS-IGF2F8WCM5 200 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 NDUFS6O75380 124 aaKnown RBP7.81□□□□□ -1.16
LINC01643-201ENST00000412218 SAP30O75446 220 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 BRI3O95415 125 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 IFNA4P05014 189 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 PMS2P11Q13670 270 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 FFAR4Q5NUL3 377 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 ATRAIDQ6UW56 229 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.81□□□□□ -1.16
LINC01643-201ENST00000412218 TEX45Q8NA69 505 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 OR5T1Q8NG75 326 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 OR1L8Q8NGR8 309 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 TMEM68Q96MH6 324 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 ACTR3CQ9C0K3 210 aaPredicted RBP7.81□□□□□ -1.16
LINC01643-201ENST00000412218 MAP1LC3BQ9GZQ8 125 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 ZNF355PQ9NSJ1 428 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 SLC39A9Q9NUM3 307 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 RFNGQ9Y644 331 aa7.81□□□□□ -1.16
LINC01643-201ENST00000412218 LOC102723971A0A1B0GUV8 181 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 A0A1B0GV50 99 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 SMCO3A2RU48 225 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 C9JQL5 133 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 PRSS46E5RG02 174 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 DNASE2O00115 360 aaPredicted RBP7.8□□□□□ -1.16
LINC01643-201ENST00000412218 CYB5BO43169 146 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 OPRK1P41145 380 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 RPL8P62917 257 aaKnown RBP7.8□□□□□ -1.16
LINC01643-201ENST00000412218 RAB31Q13636 194 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 PRSS8Q16651 343 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 ACSM6Q6P461 480 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 CLRN3Q8NCR9 226 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 OR10G4Q8NGN3 311 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 COMMD5Q9GZQ3 224 aa7.8□□□□□ -1.16
LINC01643-201ENST00000412218 A0A0G2JLM5 398 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 TEX50A0A1B0GTY4 177 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 NHLRC4P0CG21 123 aaPredicted RBP7.79□□□□□ -1.16
LINC01643-201ENST00000412218 BCL2P10415 239 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 CCL20P78556 96 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 ERHP84090 104 aaKnown RBP7.79□□□□□ -1.16
LINC01643-201ENST00000412218 ICAM4Q14773 271 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 RHEBQ15382 184 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 ZNF726P1Q15940 193 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 TNXAQ16473 311 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 HAGHQ16775 308 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 C2orf83Q53S99 150 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 SOHLH1Q5JUK2 328 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 LCN15Q6UWW0 184 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 OR10G9Q8NGN4 311 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 OR10G7Q8NGN6 311 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 SRSF12Q8WXF0 261 aaKnown RBP7.79□□□□□ -1.16
LINC01643-201ENST00000412218 HINT2Q9BX68 163 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 NPVFQ9HCQ7 196 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 MANBALQ9NQG1 85 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 GNG13Q9P2W3 67 aa7.79□□□□□ -1.16
LINC01643-201ENST00000412218 SRP19P09132 144 aaKnown RBP7.78□□□□□ -1.16
LINC01643-201ENST00000412218 APELAP0DMC3 54 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 MAS1LP35410 378 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 NPBWR1P48145 328 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 CDC34P49427 236 aaPredicted RBP7.78□□□□□ -1.16
LINC01643-201ENST00000412218 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC01643-201ENST00000412218 BSXQ3C1V8 233 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 MMD2Q8IY49 270 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 RPP25LQ8N5L8 163 aaKnown RBP7.78□□□□□ -1.16
LINC01643-201ENST00000412218 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 GGTLC1Q9BX51 225 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 ZNF430Q9H8G1 570 aaPredicted RBP7.78□□□□□ -1.16
LINC01643-201ENST00000412218 SLC25A22Q9H936 323 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 VAX2Q9UIW0 290 aa7.78□□□□□ -1.16
LINC01643-201ENST00000412218 FAM74A7A6NL05 159 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 TSPAN4O14817 238 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 OR13C7P0DN81 318 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 RNASE2P10153 161 aaKnown RBP7.77□□□□□ -1.17
LINC01643-201ENST00000412218 GP9P14770 177 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 FAM74A3Q4VXF1 159 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 C10orf55Q5SWW7 151 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 ZNF343Q6P1L6 599 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 FAM122CQ6P4D5 195 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 TEPPQ6URK8 271 aa7.77□□□□□ -1.17
LINC01643-201ENST00000412218 RXFP4Q8TDU9 374 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms