RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 A6NHS1 94 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 DBX1A6NMT0 343 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 I3L2K1 104 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 SCGB2A1O75556 95 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 P0C879 139 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 PGAM2P15259 253 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 HTN3P15516 51 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 UCP1P25874 307 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 P2RY1P47900 373 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 NPBWR1P48145 328 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 EMP1P54849 157 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 KLF9Q13886 244 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 SURF2Q15527 256 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 PYDC2Q56P42 97 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 DCANP1Q8TF63 244 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 GLYATL2Q8WU03 294 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 METTL26Q96S19 204 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 RAB40CQ96S21 281 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 TP53RKQ96S44 253 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 SDHCQ99643 169 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 PRRT1Q99946 306 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 COPZ2Q9P299 210 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 XCL2Q9UBD3 114 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 NSG2Q9Y328 171 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 PUS1Q9Y606 427 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 RFNGQ9Y644 331 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
HMGN1P20-201ENST00000411849 TEX13DA0A0J9YY54 714 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 CRYM-AS1A6NIL9 109 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 B3GALNT1O75752 331 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 CDS2O95674 445 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 MT-CO2P00403 227 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 IGKV1-5P01602 117 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 HOXA1P49639 335 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 AP2S1P53680 142 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 SNRPD3P62318 126 aaKnown RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 DHRS2Q13268 280 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 BAK1Q16611 211 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 SP6Q3SY56 376 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 PSMG4Q5JS54 123 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 SPANXN2Q5MJ10 180 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 TMEM88Q6PEY1 159 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 GSG1LQ6UXU4 331 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 H2BFWTQ7Z2G1 175 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 TOMM5Q8N4H5 51 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 CCDC71LQ8N9Z2 235 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 DEDD2Q8WXF8 326 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 TMEM230Q96A57 120 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 PINX1Q96BK5 328 aaKnown RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 SCGB3A2Q96PL1 93 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 TSC22D3Q99576 134 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 SRRQ9GZT4 340 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 TMEM222Q9H0R3 208 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 NAA60Q9H7X0 242 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 DKK2Q9UBU2 259 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 SCP2D1Q9UJQ7 156 aa4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 C14orf166Q9Y224 244 aaKnown RBP4.25□□□□□ -1.73
HMGN1P20-201ENST00000411849 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 A0A0B4J293 547 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 A0A0G2JRQ6 117 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 A0A1B0GU03 582 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 IGHV3-48P01763 117 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 OR5AC1P0C628 307 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 CRYBB3P26998 211 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 CCL18P55774 89 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 AP3S2P59780 193 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 HSPE1P61604 102 aaKnown RBP4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 DAD1P61803 113 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 SUPT4H1P63272 117 aaKnown RBP4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 DHODHQ02127 395 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 IZUMO4Q1ZYL8 232 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 LINC00299Q6ZSB3 139 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 SELENOHQ8IZQ5 122 aaKnown RBP4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 OR4A16Q8NH70 328 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 ZNRF2Q8NHG8 242 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 LHFPL5Q8TAF8 219 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 SEPSECSQ9HD40 501 aaKnown RBP4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 MCUBQ9NWR8 336 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 PTTG2Q9NZH5 202 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 TMEM56-RWDD3S4R434 201 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
HMGN1P20-201ENST00000411849 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 FAM90A26D6RGX4 464 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 INS-IGF2F8WCM5 200 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 H3BMM0 161 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 CORTO00230 105 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 ATG12O94817 140 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 TMEM50AO95807 157 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 HBE1P02100 147 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 HLA-DRB4P13762 266 aa4.23□□□□□ -1.73
HMGN1P20-201ENST00000411849 BTF3P20290 206 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms