RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 NRN1Q9NPD7 142 aa16.24■□□□□ 0.19
MSH6-202ENST00000411819 CLEC5AQ9NY25 188 aa16.24■□□□□ 0.19
MSH6-202ENST00000411819 ZFP92A6NM28 416 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 FAM90A26D6RGX4 464 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 VAMP1P23763 118 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 KLF9Q13886 244 aaPredicted RBP16.23■□□□□ 0.19
MSH6-202ENST00000411819 RPP25LQ8N5L8 163 aaKnown RBP16.23■□□□□ 0.19
MSH6-202ENST00000411819 TRIM63Q969Q1 353 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 RNF125Q96EQ8 232 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 SLC35E1Q96K37 410 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 RAB40CQ96S21 281 aa16.23■□□□□ 0.19
MSH6-202ENST00000411819 PIGBOS1A0A0B4J2F0 54 aa16.22■□□□□ 0.19
MSH6-202ENST00000411819 CCDC160A6NGH7 325 aa16.22■□□□□ 0.19
MSH6-202ENST00000411819 BUB3O43684 328 aa16.22■□□□□ 0.19
MSH6-202ENST00000411819 DEDDO75618 318 aa16.22■□□□□ 0.19
MSH6-202ENST00000411819 C2CD4CQ8TF44 421 aa16.22■□□□□ 0.19
MSH6-202ENST00000411819 IAPPP10997 89 aa16.21■□□□□ 0.19
MSH6-202ENST00000411819 MIFP14174 115 aa16.21■□□□□ 0.19
MSH6-202ENST00000411819 NUP62P37198 522 aaPredicted RBP16.21■□□□□ 0.19
MSH6-202ENST00000411819 LGALS9CQ6DKI2 356 aa16.21■□□□□ 0.19
MSH6-202ENST00000411819 PAIP2BQ9ULR5 123 aaKnown RBP16.21■□□□□ 0.19
MSH6-202ENST00000411819 KMT2AQ03164 3969 aa16.21■□□□□ 0.19
MSH6-202ENST00000411819 DUXBA0A1W2PPF3 345 aa16.2■□□□□ 0.18
MSH6-202ENST00000411819 RBMY1A1P0DJD3 496 aaKnown RBP16.2■□□□□ 0.18
MSH6-202ENST00000411819 RBMY1CP0DJD4 496 aa16.2■□□□□ 0.18
MSH6-202ENST00000411819 RBMY1FQ15415 496 aaKnown RBP16.2■□□□□ 0.18
MSH6-202ENST00000411819 TMEM128Q5BJH2 165 aa16.2■□□□□ 0.18
MSH6-202ENST00000411819 PFDN2Q9UHV9 154 aa16.2■□□□□ 0.18
MSH6-202ENST00000411819 TBC1D24Q9ULP9 559 aa16.2■□□□□ 0.18
MSH6-202ENST00000411819 V9GYH0 126 aa16.2■□□□□ 0.18
MSH6-202ENST00000411819 ZNF705EA8MWA4 302 aaPredicted RBP16.19■□□□□ 0.18
MSH6-202ENST00000411819 S100A5P33763 92 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 ATP5IP56385 69 aaPredicted RBP16.19■□□□□ 0.18
MSH6-202ENST00000411819 LYZP61626 148 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 NUTF2P61970 127 aaKnown RBP16.19■□□□□ 0.18
MSH6-202ENST00000411819 RAB11AP62491 216 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 ZNF90Q03938 601 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 GAMTQ14353 236 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 CENPSQ8N2Z9 138 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 X6R8D5 127 aa16.19■□□□□ 0.18
MSH6-202ENST00000411819 GPX4P36969 197 aaPredicted RBP16.18■□□□□ 0.18
MSH6-202ENST00000411819 OR8G2PQ6IF36 304 aa16.18■□□□□ 0.18
MSH6-202ENST00000411819 HRH4Q9H3N8 390 aa16.18■□□□□ 0.18
MSH6-202ENST00000411819 IGKV1D-37A0A075B6S9 117 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 IGLL5B9A064 214 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 C11orf94C9JXX5 98 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 FABP1P07148 127 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 HLA-DMBP28068 263 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 CSNK1G2-AS1Q8NCQ2 148 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 PPP1R14BQ96C90 147 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 SLC25A21Q9BQT8 299 aaPredicted RBP16.17■□□□□ 0.18
MSH6-202ENST00000411819 C1QTNF4Q9BXJ3 329 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 SEPSECSQ9HD40 501 aaKnown RBP16.17■□□□□ 0.18
MSH6-202ENST00000411819 XCL2Q9UBD3 114 aa16.17■□□□□ 0.18
MSH6-202ENST00000411819 PITX3O75364 302 aa16.16■□□□□ 0.18
MSH6-202ENST00000411819 OR2F1Q13607 317 aa16.16■□□□□ 0.18
MSH6-202ENST00000411819 ZNF79Q15937 498 aa16.16■□□□□ 0.18
MSH6-202ENST00000411819 ELOA3CA0A087WX78 387 aaPredicted RBP16.15■□□□□ 0.18
MSH6-202ENST00000411819 H3BMM0 161 aa16.15■□□□□ 0.18
MSH6-202ENST00000411819 MED6O75586 246 aa16.15■□□□□ 0.18
MSH6-202ENST00000411819 TCTAP57738 103 aa16.15■□□□□ 0.18
MSH6-202ENST00000411819 PPP1R1AQ13522 171 aa16.15■□□□□ 0.18
MSH6-202ENST00000411819 Q6ZTC4 211 aa16.15■□□□□ 0.18
MSH6-202ENST00000411819 LRTM2Q8N967 370 aa16.15■□□□□ 0.18
MSH6-202ENST00000411819 SFT2D2O95562 160 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 SLC25A6P12236 298 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 HLA-DRB4P13762 266 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 NKX2-1P43699 371 aaPredicted RBP16.14■□□□□ 0.17
MSH6-202ENST00000411819 COQ8AQ8NI60 647 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 LINC00052Q96N35 136 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 MAGT1Q9H0U3 335 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 TMED3Q9Y3Q3 217 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 HLA-DRB4X5D2U9 266 aa16.14■□□□□ 0.17
MSH6-202ENST00000411819 FRAS1Q86XX4 4008 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 SNRPGP15A8MWD9 76 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 WRBO00258 174 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 IGKV3-20P01619 116 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 HOXB5P09067 269 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 ID1P41134 155 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 DEFB1P60022 68 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 DEDD2Q8WXF8 326 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 CIB3Q96Q77 187 aaPredicted RBP16.13■□□□□ 0.17
MSH6-202ENST00000411819 TRGV9Q99603 122 aa16.13■□□□□ 0.17
MSH6-202ENST00000411819 WDR12Q9GZL7 423 aaKnown RBP16.13■□□□□ 0.17
MSH6-202ENST00000411819 TRAV10A0A0B4J240 114 aa16.12■□□□□ 0.17
MSH6-202ENST00000411819 RPP30P78346 268 aaKnown RBP16.12■□□□□ 0.17
MSH6-202ENST00000411819 GDF5OSQ5U4N7 250 aa16.12■□□□□ 0.17
MSH6-202ENST00000411819 CCDC190Q86UF4 302 aa16.12■□□□□ 0.17
MSH6-202ENST00000411819 APLNQ9ULZ1 77 aa16.12■□□□□ 0.17
MSH6-202ENST00000411819 CELA1Q9UNI1 258 aa16.12■□□□□ 0.17
MSH6-202ENST00000411819 SYNGR2O43760 224 aa16.11■□□□□ 0.17
MSH6-202ENST00000411819 INPP1P49441 399 aa16.11■□□□□ 0.17
MSH6-202ENST00000411819 C1orf194Q5T5A4 169 aa16.11■□□□□ 0.17
MSH6-202ENST00000411819 GSG1LQ6UXU4 331 aa16.11■□□□□ 0.17
MSH6-202ENST00000411819 OR8I2Q8N0Y5 310 aa16.11■□□□□ 0.17
MSH6-202ENST00000411819 IGKV1OR2-108A0A075B7D4 117 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 H3BP45 60 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 PSMB3P49720 205 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 FXYD7P58549 80 aa16.1■□□□□ 0.17
MSH6-202ENST00000411819 PRR20EP86478 221 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms