RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 GPN1Q9HCN4 374 aaPredicted RBP12.17□□□□□ -0.46
NOD1-202ENST00000411552 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 U3KQE9 123 aa12.17□□□□□ -0.46
NOD1-202ENST00000411552 C7orf66A4D0T2 115 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 CCNKO75909 580 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 HNRNPCP07910 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
NOD1-202ENST00000411552 P2RY1P47900 373 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 TFPI2P48307 235 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 TAS2R30P59541 319 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 ODF3L2Q3SX64 289 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 OR8G2PQ6IF36 304 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 TMEM14EPQ6UXP3 125 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 ACOT7LQ6ZUV0 252 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 OR51G1Q8NGK1 321 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 NARS2Q96I59 477 aaKnown RBP12.16□□□□□ -0.46
NOD1-202ENST00000411552 TRGV9Q99603 122 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 TM2D3Q9BRN9 247 aa12.16□□□□□ -0.46
NOD1-202ENST00000411552 SNRPGP15A8MWD9 76 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 K7EPK0 472 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 PRAF2O60831 178 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 TSC22D2O75157 780 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 METTL15P1P0C7V9 234 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 RPL11P62913 178 aaKnown RBP12.15□□□□□ -0.46
NOD1-202ENST00000411552 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 CITED4Q96RK1 184 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 MS4A6AQ9H2W1 248 aa12.15□□□□□ -0.46
NOD1-202ENST00000411552 LSM5Q9Y4Y9 91 aaKnown RBP12.15□□□□□ -0.46
NOD1-202ENST00000411552 FABP1P07148 127 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 PAFAH1B2P68402 229 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 AKR1C1Q04828 323 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 IL15RAQ13261 267 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 OR2F1Q13607 317 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 RCHY1Q96PM5 261 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 PBDC1Q9BVG4 233 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 ZMAT4Q9H898 229 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 RABAC1Q9UI14 185 aa12.14□□□□□ -0.47
NOD1-202ENST00000411552 SMCO3A2RU48 225 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 L7N2F9 121 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 LYZP61626 148 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 VAMP2P63027 116 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 C16orf54Q6UWD8 224 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 GLMPQ8WWB7 406 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 C11orf1Q9H5F2 150 aa12.13□□□□□ -0.47
NOD1-202ENST00000411552 TRAV2A0A0B4J234 112 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 DNASE2O00115 360 aaPredicted RBP12.12□□□□□ -0.47
NOD1-202ENST00000411552 BUB3O43684 328 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 EIF2B2P49770 351 aaKnown RBP12.12□□□□□ -0.47
NOD1-202ENST00000411552 S100A10P60903 97 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
NOD1-202ENST00000411552 DLK1P80370 383 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 TMEM144Q7Z5S9 345 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 STXBP6Q8NFX7 210 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 OR10P1Q8NGE3 313 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 SPATA25Q9BR10 227 aa12.12□□□□□ -0.47
NOD1-202ENST00000411552 GOSR2O14653 212 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 SIX6O95475 246 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 ARL16Q0P5N6 197 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 RAB32Q13637 225 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 APRG1Q8IVJ8 170 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 FAM24BQ8N5W8 94 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 MAP6D1Q9H9H5 199 aa12.11□□□□□ -0.47
NOD1-202ENST00000411552 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
NOD1-202ENST00000411552 HELTA6NFD8 242 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 PVALBP20472 110 aaPredicted RBP12.1□□□□□ -0.47
NOD1-202ENST00000411552 GATA2P23769 480 aaPredicted RBP12.1□□□□□ -0.47
NOD1-202ENST00000411552 BCAP31P51572 246 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 CAV2P51636 162 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 CMC4P56277 68 aaPredicted RBP12.1□□□□□ -0.47
NOD1-202ENST00000411552 ZNF124Q15973 351 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 TMEM182Q6ZP80 229 aaPredicted RBP12.1□□□□□ -0.47
NOD1-202ENST00000411552 STPG3Q8N7X2 389 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 WWC2-AS2Q96NR7 200 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 RETNQ9HD89 108 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 MGAT4CQ9UBM8 478 aa12.1□□□□□ -0.47
NOD1-202ENST00000411552 FNDC10F2Z333 226 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 K7EQG2 157 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 CFDP00746 253 aaPredicted RBP12.09□□□□□ -0.47
NOD1-202ENST00000411552 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
NOD1-202ENST00000411552 SIGLEC15Q6ZMC9 328 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 DCANP1Q8TF63 244 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
NOD1-202ENST00000411552 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 SSNA1O43805 119 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 DEDDO75618 318 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 CST7O76096 145 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 PTTG1O95997 202 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 AP2S1P53680 142 aaPredicted RBP12.08□□□□□ -0.48
NOD1-202ENST00000411552 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 GGACTQ9BVM4 153 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 NMES1Q9C002 83 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms