RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 FABP1P07148 127 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 RBMY1A1P0DJD3 496 aaKnown RBP10.54□□□□□ -0.72
MCF2L-210ENST00000409954 RBMY1CP0DJD4 496 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 PSG1P11464 419 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 FAUP35544 74 aaKnown RBP10.54□□□□□ -0.72
MCF2L-210ENST00000409954 RBMY1FQ15415 496 aaKnown RBP10.54□□□□□ -0.72
MCF2L-210ENST00000409954 USF2Q15853 346 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-210ENST00000409954 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 SLIRPQ9GZT3 109 aaKnown RBP10.54□□□□□ -0.72
MCF2L-210ENST00000409954 RBKSQ9H477 322 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 TBC1D24Q9ULP9 559 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 ALMS1Q8TCU4 4167 aa10.54□□□□□ -0.72
MCF2L-210ENST00000409954 DUXBA0A1W2PPF3 345 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 AP3S2P59780 193 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 SUPT4H1P63272 117 aaKnown RBP10.53□□□□□ -0.72
MCF2L-210ENST00000409954 TMEM128Q5BJH2 165 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 RPP25LQ8N5L8 163 aaKnown RBP10.53□□□□□ -0.72
MCF2L-210ENST00000409954 OR1S1Q8NH92 325 aa10.53□□□□□ -0.72
MCF2L-210ENST00000409954 ZFP92A6NM28 416 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 IGLL5B9A064 214 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 HLA-DMBP28068 263 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 NKX2-1P43699 371 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-210ENST00000409954 RAB11AP62491 216 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 C1orf194Q5T5A4 169 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 MCFD2Q8NI22 146 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 DEDD2Q8WXF8 326 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 RNF125Q96EQ8 232 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 APLNQ9ULZ1 77 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 X6R8D5 127 aa10.52□□□□□ -0.73
MCF2L-210ENST00000409954 TRAV10A0A0B4J240 114 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 H3BMM0 161 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 SLC25A6P12236 298 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 ID1P41134 155 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
MCF2L-210ENST00000409954 GAMTQ14353 236 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 SLC35E1Q96K37 410 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 SLC25A21Q9BQT8 299 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-210ENST00000409954 PRR13Q9NZ81 148 aa10.51□□□□□ -0.73
MCF2L-210ENST00000409954 PITX3O75364 302 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 MED6O75586 246 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 DEDDO75618 318 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 CFDP00746 253 aaPredicted RBP10.5□□□□□ -0.73
MCF2L-210ENST00000409954 C4BPBP20851 252 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 SPATA31B1PQ5VZV4 182 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 TOMM5Q8N4H5 51 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 CLUHP3Q96NS8 147 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 PBDC1Q9BVG4 233 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
MCF2L-210ENST00000409954 ELOA3CA0A087WX78 387 aaPredicted RBP10.49□□□□□ -0.73
MCF2L-210ENST00000409954 H3BMQ9 156 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 SAMD13Q5VXD3 122 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 GGNBP1Q5YKI7 109 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
MCF2L-210ENST00000409954 NEU1Q99519 415 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 TRGV9Q99603 122 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 XCL2Q9UBD3 114 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 TMED3Q9Y3Q3 217 aa10.49□□□□□ -0.73
MCF2L-210ENST00000409954 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 HLA-DRB4P13762 266 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 S100A5P33763 92 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 ZNF90Q03938 601 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 PYDC2Q56P42 97 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 TMED4Q7Z7H5 227 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 RNF126Q9BV68 326 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 HLA-DRB4X5D2U9 266 aa10.48□□□□□ -0.73
MCF2L-210ENST00000409954 IGKV1D-37A0A075B6S9 117 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 TMEM189A5PLL7 270 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 VAMP1P23763 118 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 S100A7P31151 101 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 FOXI2Q6ZQN5 318 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 Q6ZTC4 211 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 LINC00052Q96N35 136 aa10.47□□□□□ -0.73
MCF2L-210ENST00000409954 PSMB3P49720 205 aa10.46□□□□□ -0.73
MCF2L-210ENST00000409954 LYZP61626 148 aa10.46□□□□□ -0.73
MCF2L-210ENST00000409954 C12orf74Q32Q52 190 aa10.46□□□□□ -0.73
MCF2L-210ENST00000409954 THAP8Q8NA92 274 aa10.46□□□□□ -0.73
MCF2L-210ENST00000409954 PPP1R14BQ96C90 147 aa10.46□□□□□ -0.73
MCF2L-210ENST00000409954 SAV1Q9H4B6 383 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-210ENST00000409954 SLC45A2Q9UMX9 530 aa10.46□□□□□ -0.73
MCF2L-210ENST00000409954 AGRNO00468 2067 aa10.46□□□□□ -0.74
MCF2L-210ENST00000409954 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 DEFB131BA0A096LNP1 70 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 ISLRO14498 428 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 SYNGR2O43760 224 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 SFT2D2O95562 160 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 MEOX2P50222 304 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 PRR20EP86478 221 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 PRR20CP86479 221 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 PRR20DP86480 221 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 PRR20BP86481 221 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 PRR20AP86496 221 aa10.45□□□□□ -0.74
MCF2L-210ENST00000409954 EBLN2Q6P2I7 272 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms