RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 TBR1Q16650 682 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 PRR27Q6MZM9 219 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 LINC00305Q7Z4B0 112 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 C18orf32Q8TCD1 76 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 WIPF2Q8TF74 440 aaPredicted RBP12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 TMEM186Q96B77 213 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 GRAMD2BQ96HH9 432 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 SAP30LQ9HAJ7 183 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 ZNF841Q6ZN19 808 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 LHFPL4Q7Z7J7 247 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 CCL17Q92583 94 aa12.2□□□□□ -0.46
LYSMD4-204ENST00000409796 CORTO00230 105 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 MOSP00540 346 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 NTF3P20783 257 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 MRGPRG-AS1Q2M3A8 158 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 NCOR2Q9Y618 2525 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 PKDREJQ9NTG1 2253 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 C22orf46C9J442 243 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 NDUFB3O43676 98 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 SPACA3Q8IXA5 215 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 LINC00311Q8N616 119 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 ZNF738Q8NE65 137 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 ZNF596Q8TC21 504 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 SGK494Q96LW2 274 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
LYSMD4-204ENST00000409796 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 PCNX1Q96RV3 2341 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 A0A0G2JNJ9 132 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 C16orf97H3BN30 126 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 ORM2P19652 201 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 MYCNOSP40205 109 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 PRRX1P54821 245 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 RASL11AQ6T310 242 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 WNT10AQ9GZT5 417 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 Q9UFV3 132 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 TNFRSF13BO14836 293 aaPredicted RBP12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 TSPOP30536 169 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 HCP5Q6MZN7 132 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 BLNKQ8WV28 456 aa12.18□□□□□ -0.46
LYSMD4-204ENST00000409796 LAMA5O15230 3695 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 IGHV3-72A0A0B4J1Y9 119 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 IGHV2-70DA0A0C4DH43 119 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 THBDP07204 575 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 MAJINQ3KP22 176 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 LRRC10Q5BKY1 277 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 C19orf35Q6ZS72 473 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 M0QZ24 198 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 ENSAO43768 121 aaKnown RBP12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 DLX6P56179 175 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 FBLN7Q53RD9 439 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 SSBP4Q9BWG4 385 aaPredicted RBP12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 CACNA1BQ00975 2339 aa12.17□□□□□ -0.46
LYSMD4-204ENST00000409796 VWC2LB2RUY7 222 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 GPR6P46095 362 aaPredicted RBP12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 UBE2G1P62253 170 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 TNXAQ16473 311 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 PERPQ96FX8 193 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 RPH3ALQ9UNE2 315 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 IGLC7A0M8Q6 106 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 PGPA6NDG6 321 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 HIGD1CA8MV81 97 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 PPBPP02775 128 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 ZNF137PP52743 207 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 BORCS7Q96B45 105 aa12.16□□□□□ -0.46
LYSMD4-204ENST00000409796 CRYGCP07315 174 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 APELAP0DMC3 54 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 CAMPP49913 170 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 PRR31Q5SQ13 230 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 SPTBN2O15020 2390 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 IGHV3-21A0A0B4J1V1 117 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 CHRDL1Q9BU40 450 aa12.15□□□□□ -0.46
LYSMD4-204ENST00000409796 MC5RP33032 325 aa12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 TMEM155Q4W5P6 130 aa12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 CLEC7AQ9BXN2 247 aa12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 CNTFRP26992 372 aa12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 LINC00322Q6ZN03 302 aaPredicted RBP12.14□□□□□ -0.47
LYSMD4-204ENST00000409796 TCF24Q7RTU0 167 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms