RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 IGF2BP2-AS1Q96M15 143 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 RASL11BQ9BPW5 248 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 NPIPB5A8MRT5 1133 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 GOSR1O95249 250 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 SMIM6P0DI80 62 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 TMEM11P17152 192 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 PDLIM4P50479 330 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 NDPQ00604 133 aa15.9■□□□□ 0.14
USP39-204ENST00000409766 BBC3Q96PG8 261 aaPredicted RBP15.9■□□□□ 0.14
USP39-204ENST00000409766 IGLV2-8P01709 118 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 KLF17Q5JT82 389 aaPredicted RBP15.89■□□□□ 0.13
USP39-204ENST00000409766 ACTL10Q5JWF8 245 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 CDC42EP3Q9UKI2 254 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 SLC17A3O00476 420 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 GP9P14770 177 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 RBM14Q96PK6 669 aaKnown RBP15.89■□□□□ 0.13
USP39-204ENST00000409766 IL36BQ9NZH7 164 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 HIGD1AQ9Y241 93 aa15.89■□□□□ 0.13
USP39-204ENST00000409766 DOPEY1Q5JWR5 2465 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 A0A0U1RQK1 487 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 ZNF320A2RRD8 509 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 GCGP01275 180 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 SNRPCP09234 159 aaKnown RBP15.88■□□□□ 0.13
USP39-204ENST00000409766 TAS2R60P59551 318 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 ERVFC1-1P60608 527 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 LYZP61626 148 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 GFI1BQ5VTD9 330 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 TTC9CQ8N5M4 171 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 FANCD2OSQ96PS1 177 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 POLR3KQ9Y2Y1 108 aaPredicted RBP15.88■□□□□ 0.13
USP39-204ENST00000409766 V9GYV3 84 aa15.88■□□□□ 0.13
USP39-204ENST00000409766 IGLV11-55A0A075B6I3 123 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 PRB1P04280 392 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 NBEAP1P0C6P0 100 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 FAM106CPP0CH98 169 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 RD3LP0DJH9 198 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 SAA4P35542 130 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 RANP62826 216 aaKnown RBP15.87■□□□□ 0.13
USP39-204ENST00000409766 LINC00479Q96M42 142 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 LPAR2Q9HBW0 351 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 PEX7O00628 323 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 S100A9P06702 114 aaKnown RBP15.87■□□□□ 0.13
USP39-204ENST00000409766 RPL15P61313 204 aaKnown RBP15.87■□□□□ 0.13
USP39-204ENST00000409766 FAM120AOSQ5T036 256 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 LEMD1Q68G75 181 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 HIST3H2BBQ8N257 126 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 Q8N9W7 124 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 BLNKQ8WV28 456 aa15.87■□□□□ 0.13
USP39-204ENST00000409766 MRPL27Q9P0M9 148 aaKnown RBP15.87■□□□□ 0.13
USP39-204ENST00000409766 CCL19Q99731 98 aa15.86■□□□□ 0.13
USP39-204ENST00000409766 SLC25A39Q9BZJ4 359 aaPredicted RBP15.86■□□□□ 0.13
USP39-204ENST00000409766 PITPNC1Q9UKF7 332 aa15.86■□□□□ 0.13
USP39-204ENST00000409766 FABP1P07148 127 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 CNN1P51911 297 aaKnown RBP15.85■□□□□ 0.13
USP39-204ENST00000409766 OSTCQ9NRP0 149 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 VPS13CQ709C8 3753 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 USP9XQ93008 2570 aaPredicted RBP15.85■□□□□ 0.13
USP39-204ENST00000409766 TRAV9-1A0A075B6T8 112 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 IGHV7-81A0A0B4J1V7 117 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 ISLRO14498 428 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 EGR2P11161 476 aaPredicted RBP15.85■□□□□ 0.13
USP39-204ENST00000409766 GPR61Q9BZJ8 451 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 RNASE7Q9H1E1 156 aaKnown RBP15.85■□□□□ 0.13
USP39-204ENST00000409766 GAR1Q9NY12 217 aaKnown RBP15.85■□□□□ 0.13
USP39-204ENST00000409766 C1RLQ9NZP8 487 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 ABCA2Q9BZC7 2435 aa15.85■□□□□ 0.13
USP39-204ENST00000409766 RNF224P0DH78 156 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 BRS3P32247 399 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 ZNF600Q6ZNG1 722 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 EPDR1Q9UM22 224 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 ZFYVE26Q68DK2 2539 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 NPFFO15130 113 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 TOMM40O96008 361 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 FAM168AQ92567 244 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 ZNF48Q96MX3 618 aaPredicted RBP15.84■□□□□ 0.13
USP39-204ENST00000409766 TMEM14CQ9P0S9 112 aa15.84■□□□□ 0.13
USP39-204ENST00000409766 CENPVL3A0A0U1RRI6 287 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 PGPA6NDG6 321 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 HLA-DRB1P01911 266 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 GNG5P63218 68 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 RPEL1Q2QD12 228 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 ZNF491Q8N8L2 437 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 PIMREGQ9BSJ6 248 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 S4R3C0 116 aa15.83■□□□□ 0.12
USP39-204ENST00000409766 TRAV34A0A0B4J273 112 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 PCP4L1A6NKN8 68 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 SLC25A5P05141 298 aaKnown RBP15.82■□□□□ 0.12
USP39-204ENST00000409766 MGST1P10620 155 aaKnown RBP15.82■□□□□ 0.12
USP39-204ENST00000409766 PAX8Q06710 450 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 PDZD11Q5EBL8 140 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 COA6Q5JTJ3 125 aaKnown RBP15.82■□□□□ 0.12
USP39-204ENST00000409766 TRAPPC1Q9Y5R8 145 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 TRAV30A0A087WSZ9 112 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 IGHV4-61A0A0C4DH41 118 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 F8W735 103 aaPredicted RBP15.82■□□□□ 0.12
USP39-204ENST00000409766 S100A2P29034 98 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 MFAP4P55083 255 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 TMEM183BQ1AE95 376 aa15.82■□□□□ 0.12
USP39-204ENST00000409766 IBA57Q5T440 356 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms