RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 RBKSQ9H477 322 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 PRR13Q9NZ81 148 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 IGHV4-28A0A0C4DH34 117 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 FAM90A26D6RGX4 464 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 H3BMQ9 156 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 FABP1P07148 127 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 C4BPBP20851 252 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 TNFSF8P32971 234 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 SUPT4H1P63272 117 aaKnown RBP10.72□□□□□ -0.69
CBX3-203ENST00000409747 KLF9Q13886 244 aaPredicted RBP10.72□□□□□ -0.69
CBX3-203ENST00000409747 LYZL2Q7Z4W2 148 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 MCFD2Q8NI22 146 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 SLC35E1Q96K37 410 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 RAB40CQ96S21 281 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 SOSTQ9BQB4 213 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 TBC1D24Q9ULP9 559 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 PSG1P11464 419 aa10.71□□□□□ -0.69
CBX3-203ENST00000409747 GPX4P36969 197 aaPredicted RBP10.71□□□□□ -0.69
CBX3-203ENST00000409747 OR8G2PQ6IF36 304 aa10.71□□□□□ -0.69
CBX3-203ENST00000409747 RPP25LQ8N5L8 163 aaKnown RBP10.71□□□□□ -0.69
CBX3-203ENST00000409747 RNF125Q96EQ8 232 aa10.71□□□□□ -0.69
CBX3-203ENST00000409747 FRAS1Q86XX4 4008 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 ZFP92A6NM28 416 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 AGRNO00468 2067 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
CBX3-203ENST00000409747 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 RAB11AP62491 216 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 RBMY1FQ15415 496 aaKnown RBP10.7□□□□□ -0.7
CBX3-203ENST00000409747 TMEM128Q5BJH2 165 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 TMED4Q7Z7H5 227 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 TOMM5Q8N4H5 51 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 CSNK1G2-AS1Q8NCQ2 148 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 DEDD2Q8WXF8 326 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 PBDC1Q9BVG4 233 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 X6R8D5 127 aa10.7□□□□□ -0.7
CBX3-203ENST00000409747 DEDDO75618 318 aa10.69□□□□□ -0.7
CBX3-203ENST00000409747 CLEC5AQ9NY25 188 aa10.69□□□□□ -0.7
CBX3-203ENST00000409747 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 IGLL5B9A064 214 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 SLC25A6P12236 298 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 HLA-DMBP28068 263 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 NKX2-1P43699 371 aaPredicted RBP10.68□□□□□ -0.7
CBX3-203ENST00000409747 GAMTQ14353 236 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
CBX3-203ENST00000409747 SLC25A21Q9BQT8 299 aaPredicted RBP10.68□□□□□ -0.7
CBX3-203ENST00000409747 H3BMM0 161 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 MED6O75586 246 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 HLA-DRB4P13762 266 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 VAMP1P23763 118 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 ID1P41134 155 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 RPP30P78346 268 aaKnown RBP10.67□□□□□ -0.7
CBX3-203ENST00000409747 C1orf194Q5T5A4 169 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 LRTM2Q8N967 370 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 CIB3Q96Q77 187 aaPredicted RBP10.67□□□□□ -0.7
CBX3-203ENST00000409747 HLA-DRB4X5D2U9 266 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 SNRPGP15A8MWD9 76 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 PITX3O75364 302 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 S100A5P33763 92 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 ZNF90Q03938 601 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 SAMD13Q5VXD3 122 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 TMED3Q9Y3Q3 217 aa10.67□□□□□ -0.7
CBX3-203ENST00000409747 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
CBX3-203ENST00000409747 CFDP00746 253 aaPredicted RBP10.66□□□□□ -0.7
CBX3-203ENST00000409747 PSMB3P49720 205 aa10.66□□□□□ -0.7
CBX3-203ENST00000409747 LYZP61626 148 aa10.66□□□□□ -0.7
CBX3-203ENST00000409747 Q6ZTC4 211 aa10.66□□□□□ -0.7
CBX3-203ENST00000409747 PPP1R14BQ96C90 147 aa10.66□□□□□ -0.7
CBX3-203ENST00000409747 TRGV9Q99603 122 aa10.66□□□□□ -0.7
CBX3-203ENST00000409747 APLNQ9ULZ1 77 aa10.66□□□□□ -0.7
CBX3-203ENST00000409747 IGKV1D-37A0A075B6S9 117 aa10.65□□□□□ -0.7
CBX3-203ENST00000409747 IAPPP10997 89 aa10.65□□□□□ -0.7
CBX3-203ENST00000409747 FOXI2Q6ZQN5 318 aa10.65□□□□□ -0.7
CBX3-203ENST00000409747 COQ8AQ8NI60 647 aa10.65□□□□□ -0.7
CBX3-203ENST00000409747 XCL2Q9UBD3 114 aa10.65□□□□□ -0.7
CBX3-203ENST00000409747 PAIP2BQ9ULR5 123 aaKnown RBP10.65□□□□□ -0.7
CBX3-203ENST00000409747 V9GYH0 126 aa10.65□□□□□ -0.7
CBX3-203ENST00000409747 VPS13DQ5THJ4 4388 aa10.65□□□□□ -0.71
CBX3-203ENST00000409747 SPATA31B1PQ5VZV4 182 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 CCDC160A6NGH7 325 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 SFT2D2O95562 160 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 S100A7P31151 101 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 GGNBP1Q5YKI7 109 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 OR8I2Q8N0Y5 310 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 THAP8Q8NA92 274 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 CLUHP3Q96NS8 147 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 NEU1Q99519 415 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
CBX3-203ENST00000409747 SAV1Q9H4B6 383 aaPredicted RBP10.64□□□□□ -0.71
CBX3-203ENST00000409747 DNAH10Q8IVF4 4471 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 ISLRO14498 428 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 SYNGR2O43760 224 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 MEOX2P50222 304 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 PPP1R1AQ13522 171 aa10.63□□□□□ -0.71
CBX3-203ENST00000409747 OR2F1Q13607 317 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms