RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 HSPB1P04792 205 aaKnown RBP10.95□□□□□ -0.66
GPNMB-203ENST00000409458 SRP19P09132 144 aaKnown RBP10.95□□□□□ -0.66
GPNMB-203ENST00000409458 GCHFRP30047 84 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
GPNMB-203ENST00000409458 PSMB3P49720 205 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 LYZP61626 148 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 C10orf91Q5T1B1 145 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 ZNF503Q96F45 646 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 RNF2Q99496 336 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 SLC35B3Q9H1N7 401 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 SMDT1Q9H4I9 107 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 MANBALQ9NQG1 85 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 VAX2Q9UIW0 290 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 TRAV30A0A087WSZ9 112 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 ELOA3CA0A087WX78 387 aaPredicted RBP10.95□□□□□ -0.66
GPNMB-203ENST00000409458 RD3LP0DJH9 198 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 C8orf88P0DMB2 117 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 CFHR3Q02985 330 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 RBMS3Q6XE24 437 aaKnown RBP10.95□□□□□ -0.66
GPNMB-203ENST00000409458 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 CCDC140Q96MF4 163 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 DUX5Q96PT3 197 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 TXN2Q99757 166 aa10.95□□□□□ -0.66
GPNMB-203ENST00000409458 CARHSP1Q9Y2V2 147 aaKnown RBP10.95□□□□□ -0.66
GPNMB-203ENST00000409458 PAGE4O60829 102 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 HYPMO75409 117 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 FABP1P07148 127 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 GPR183P32249 361 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 TAS2R45P59539 299 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 UBE2G2P60604 165 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 YPEL3P61236 119 aaPredicted RBP10.94□□□□□ -0.66
GPNMB-203ENST00000409458 GUCA2BQ16661 112 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 CYB561D1Q8N8Q1 229 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 EEF1AKMT3Q96AZ1 226 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 SMR3AQ99954 134 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
GPNMB-203ENST00000409458 FAM223BA6NKX1 122 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 H3BUA1 57 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 OR7C2O60412 319 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 TRGV3P03979 118 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 CTSGP08311 255 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 ADMP35318 185 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 TPPP2P59282 170 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 CD81P60033 236 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 MEF2BQ02080 365 aaPredicted RBP10.93□□□□□ -0.66
GPNMB-203ENST00000409458 FAM223AQ8IWN6 122 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 OR5AU1Q8NGC0 362 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 OR51G1Q8NGK1 321 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 CHRDL1Q9BU40 450 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 ZNF702PQ9H963 129 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 TLN2Q9Y4G6 2542 aa10.93□□□□□ -0.66
GPNMB-203ENST00000409458 BRI3O95415 125 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 IL4P05112 153 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 CEBPGP53567 150 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 ATP5G2Q06055 141 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 KIAA0141Q14154 515 aaPredicted RBP10.92□□□□□ -0.66
GPNMB-203ENST00000409458 PQLC2Q6ZP29 291 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 ZNF491Q8N8L2 437 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 RNF125Q96EQ8 232 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 NPFFR1Q9GZQ6 430 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 MYO9AB2RTY4 2548 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 SCGB2A1O75556 95 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 SCO1O75880 301 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 OR2C1O95371 312 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 OR10J4P0C629 311 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 HNF1AP20823 631 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 TAGLN2P37802 199 aaKnown RBP10.92□□□□□ -0.66
GPNMB-203ENST00000409458 ATP5G3P48201 142 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 CLEC19AQ6UXS0 136 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 PRSS22Q9GZN4 317 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 KLK15Q9H2R5 256 aa10.92□□□□□ -0.66
GPNMB-203ENST00000409458 MRPL27Q9P0M9 148 aaKnown RBP10.92□□□□□ -0.66
GPNMB-203ENST00000409458 YTHDF2Q9Y5A9 579 aaKnown RBP10.92□□□□□ -0.66
GPNMB-203ENST00000409458 TRBV7-1A0A0A6YYK4 115 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 NUPL2O15504 423 aaKnown RBP10.91□□□□□ -0.66
GPNMB-203ENST00000409458 CLEC3BP05452 202 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 PYYP10082 97 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 PF4V1P10720 104 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 USF2Q15853 346 aaPredicted RBP10.91□□□□□ -0.66
GPNMB-203ENST00000409458 ATRAIDQ6UW56 229 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 LCNL1Q6ZST4 164 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 TMEM86BQ8N661 226 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 Q8WTZ3 238 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
GPNMB-203ENST00000409458 TMEM167BQ9NRX6 74 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 OTOGQ6ZRI0 2925 aa10.91□□□□□ -0.66
GPNMB-203ENST00000409458 ACANP16112 2415 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 TGOLN2O43493 480 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms