RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 AGPAT2O15120 278 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 PSG1P11464 419 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 ZP3P21754 424 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 MYCNOSP40205 109 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 EIF5AP63241 154 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 FAM209BQ5JX69 171 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 RPL7L1Q6DKI1 246 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 SPSB3Q6PJ21 355 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 RSG1Q9BU20 258 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 GAR1Q9NY12 217 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 DOK5Q9P104 306 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 WDR83OSQ9Y284 106 aa10.78□□□□□ -0.68
CHRNA1-204ENST00000409323 IGHV3OR16-13A0A075B7E8 117 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 IGHV3-74A0A0B4J1X5 117 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 M0QZ24 198 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 RD3LP0DJH9 198 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 TPT1P13693 172 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 LYZP61626 148 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 ATP6V1FQ16864 119 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 KRTAP21-3Q3LHN1 58 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 TM4SF20Q53R12 229 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 MIC13Q5XKP0 118 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 TOMM20LQ6UXN7 152 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 BPIFCQ8NFQ6 507 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 TRGV9Q99603 122 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 PBDC1Q9BVG4 233 aa10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 LSM4Q9Y4Z0 139 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-204ENST00000409323 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 DFFBO76075 338 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 IL4P05112 153 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 RELQ04864 619 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 ZNF600Q6ZNG1 722 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 HSD17B11Q8NBQ5 300 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 OR51G1Q8NGK1 321 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 GGTLC1Q9BX51 225 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 WDR61Q9GZS3 305 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 SLC25A32Q9H2D1 315 aa10.77□□□□□ -0.69
CHRNA1-204ENST00000409323 VWFP04275 2813 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 IGHV3-66A0A0C4DH42 116 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 LINC00862A6NCI5 91 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 SCAF4O95104 1147 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 TOMM40O96008 361 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 IFNA5P01569 189 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 CAMLGP49069 296 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 YPEL3P61236 119 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 USF2Q15853 346 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 FAM106AQ4KMX7 169 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 C1QL4Q86Z23 238 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 GINS3Q9BRX5 216 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 NPCDR1Q9BY65 106 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 ZFAND3Q9H8U3 227 aa10.76□□□□□ -0.69
CHRNA1-204ENST00000409323 NDUFA4O00483 81 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 OVOL1O14753 267 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 SCGB2A1O75556 95 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 LINC00869P0C866 280 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 ORM2P19652 201 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 ALKAL2Q6UX46 152 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 GPHB5Q86YW7 130 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 Q8WTZ3 238 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 TMEM190Q8WZ59 177 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 ATP6V0BQ99437 205 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 SH3BGRL3Q9H299 93 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 MED9Q9NWA0 146 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 SLC45A2Q9UMX9 530 aa10.75□□□□□ -0.69
CHRNA1-204ENST00000409323 APOHP02749 345 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 NMBP08949 121 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 CD33P20138 364 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 ZNF266Q14584 549 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 GCSAMLQ5JQS6 135 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 STPG3Q8N7X2 389 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 OR1B1Q8NGR6 318 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 LRRC20Q8TCA0 184 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 PARD6GQ9BYG4 376 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 TRRAPQ9Y4A5 3859 aa10.74□□□□□ -0.69
CHRNA1-204ENST00000409323 BORCS7-ASMTA0A0B4J1R7 106 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 TMEM213A2RRL7 107 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 ELLP55199 621 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 EIF5AL1Q6IS14 154 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 RNF125Q96EQ8 232 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 PXMP4Q9Y6I8 212 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 EIF3GO75821 320 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 OR5G3P0C626 314 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 SPP1P10451 314 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 RAB14P61106 215 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 B2MP61769 119 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 RAB31Q13636 194 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 IL34Q6ZMJ4 242 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 ADAMTSL5Q6ZMM2 481 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 UHRF2Q96PU4 802 aa10.73□□□□□ -0.69
CHRNA1-204ENST00000409323 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 WI2-2373I1.2A0A1W2PRP0 233 aa10.72□□□□□ -0.69
CHRNA1-204ENST00000409323 C2orf70A6NJV1 201 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms