RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
PIKFYVE-204ENST00000407449 ERVFC1-1P60608 527 aa13.13□□□□□ -0.31
PIKFYVE-204ENST00000407449 GCGP01275 180 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 RPL15P61313 204 aaKnown RBP13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 LYZP61626 148 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 CX3CL1P78423 397 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 RBM14Q96PK6 669 aaKnown RBP13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 OSTCQ9NRP0 149 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 GAR1Q9NY12 217 aaKnown RBP13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 V9GYV3 84 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 NCBP2LA6PVI3 153 aaKnown RBP13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 SLC17A3O00476 420 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 IGKV1-17P01599 117 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 OR5I1Q13606 314 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 RPEL1Q2QD12 228 aa13.12□□□□□ -0.31
PIKFYVE-204ENST00000407449 ISLRO14498 428 aa13.11□□□□□ -0.31
PIKFYVE-204ENST00000407449 ASPHD1Q5U4P2 390 aa13.11□□□□□ -0.31
PIKFYVE-204ENST00000407449 GFI1BQ5VTD9 330 aa13.11□□□□□ -0.31
PIKFYVE-204ENST00000407449 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
PIKFYVE-204ENST00000407449 LPAR2Q9HBW0 351 aa13.11□□□□□ -0.31
PIKFYVE-204ENST00000407449 IGLV11-55A0A075B6I3 123 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 NBEAP1P0C6P0 100 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 FAM106CPP0CH98 169 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 RD3LP0DJH9 198 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 NDPQ00604 133 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 COA6Q5JTJ3 125 aaKnown RBP13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 ZNF48Q96MX3 618 aaPredicted RBP13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 GPR61Q9BZJ8 451 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 TMEM14CQ9P0S9 112 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 POLR3KQ9Y2Y1 108 aaPredicted RBP13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 PCP4L1A6NKN8 68 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 TOMM40O96008 361 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 RANP62826 216 aaKnown RBP13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 TMEM183AQ8IXX5 376 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 BLNKQ8WV28 456 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 MRPL27Q9P0M9 148 aaKnown RBP13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 TRAPPC1Q9Y5R8 145 aa13.1□□□□□ -0.31
PIKFYVE-204ENST00000407449 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
PIKFYVE-204ENST00000407449 MGST1P10620 155 aaKnown RBP13.09□□□□□ -0.31
PIKFYVE-204ENST00000407449 BRS3P32247 399 aa13.09□□□□□ -0.31
PIKFYVE-204ENST00000407449 FANCD2OSQ96PS1 177 aa13.09□□□□□ -0.31
PIKFYVE-204ENST00000407449 EPDR1Q9UM22 224 aa13.09□□□□□ -0.31
PIKFYVE-204ENST00000407449 XKRY2A2RUG3 117 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 SLC25A5P05141 298 aaKnown RBP13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 SAA4P35542 130 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 YPEL3P61236 119 aaPredicted RBP13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 Q8N9W7 124 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 CCL19Q99731 98 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 PIMREGQ9BSJ6 248 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 RNASE7Q9H1E1 156 aaKnown RBP13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 PGPA6NDG6 321 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 TMEM183BQ1AE95 376 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 IBA57Q5T440 356 aaKnown RBP13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 LEMD1Q68G75 181 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 ZNF600Q6ZNG1 722 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
PIKFYVE-204ENST00000407449 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 NPFFO15130 113 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 HLA-DRB1P01911 266 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 SNRPCP09234 159 aaKnown RBP13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 MFAP4P55083 255 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 GNG5P63218 68 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 S100A12P80511 92 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 SHANK2-AS3Q9BTD1 123 aa13.07□□□□□ -0.32
PIKFYVE-204ENST00000407449 H3BRN7 92 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 GNG7O60262 68 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 HIST1H1EP10412 219 aaKnown RBP13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 UBE2G1P62253 170 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 FAM120AOSQ5T036 256 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 FAM231DQ6ZW35 169 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 OR10D4PQ8NGN7 298 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 TMEM190Q8WZ59 177 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 ATG101Q9BSB4 218 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 Q9H3A6 140 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 THYN1Q9P016 225 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 KLF12Q9Y4X4 402 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 RPL19P84098 196 aaKnown RBP13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 FAM168AQ92567 244 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 SMIM12Q96EX1 92 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 NIT2Q9NQR4 276 aa13.06□□□□□ -0.32
PIKFYVE-204ENST00000407449 TACC2O95359 2948 aa13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 TRAV34A0A0B4J273 112 aa13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 EGR2P11161 476 aaPredicted RBP13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 FABP4P15090 132 aa13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 OR8I2Q8N0Y5 310 aa13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 ZNF491Q8N8L2 437 aa13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 NHLRC2Q8NBF2 726 aa13.05□□□□□ -0.32
PIKFYVE-204ENST00000407449 HIST1H2BLQ99880 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms