RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 FAM223BA6NKX1 122 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 CD5P06127 495 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 OR5G3P0C626 314 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 ZP3P21754 424 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 TAGLN2P37802 199 aaKnown RBP16.41■□□□□ 0.22
TPM1-208ENST00000404484 FGF8P55075 233 aaPredicted RBP16.41■□□□□ 0.22
TPM1-208ENST00000404484 Q56UQ5 140 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 FAM223AQ8IWN6 122 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 PRSS22Q9GZN4 317 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 DNAJC4Q9NNZ3 241 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 FUT9Q9Y231 359 aa16.41■□□□□ 0.22
TPM1-208ENST00000404484 STAG3L2P0CL84 134 aa16.4■□□□□ 0.22
TPM1-208ENST00000404484 STAG3L3P0CL85 134 aa16.4■□□□□ 0.22
TPM1-208ENST00000404484 TAS2R45P59539 299 aa16.4■□□□□ 0.22
TPM1-208ENST00000404484 FAM78BQ5VT40 261 aa16.4■□□□□ 0.22
TPM1-208ENST00000404484 CXorf1O96002 111 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 PSMB3P49720 205 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 PLP1P60201 277 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 C15orf32Q32M92 178 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 EEF1AKMT3Q96AZ1 226 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 ATP6V0BQ99437 205 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 MANBALQ9NQG1 85 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 GNG13Q9P2W3 67 aa16.39■□□□□ 0.21
TPM1-208ENST00000404484 PSMB11A5LHX3 300 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 HMGB3O15347 200 aaKnown RBP16.38■□□□□ 0.21
TPM1-208ENST00000404484 IGKV1-17P01599 117 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 RD3LP0DJH9 198 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 YPEL3P61236 119 aaPredicted RBP16.38■□□□□ 0.21
TPM1-208ENST00000404484 TIGITQ495A1 244 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 KHDC3LQ587J8 217 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 ZNF506Q5JVG8 444 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 C10orf113Q5VZT2 155 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 JMJD8Q96S16 334 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 SEPSECSQ9HD40 501 aaKnown RBP16.38■□□□□ 0.21
TPM1-208ENST00000404484 TECRQ9NZ01 308 aaKnown RBP16.38■□□□□ 0.21
TPM1-208ENST00000404484 TMEM218A2RU14 115 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 TOMM40O96008 361 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 BCL2P10415 239 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 PPIFP30405 207 aaKnown RBP16.38■□□□□ 0.21
TPM1-208ENST00000404484 IQCF2Q8IXL9 164 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 SCRT1Q9BWW7 348 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 TMEM231Q9H6L2 316 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 LINC00527Q9UJ94 153 aa16.38■□□□□ 0.21
TPM1-208ENST00000404484 TRBV7-1A0A0A6YYK4 115 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 HYPMO75409 117 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 PSG1P11464 419 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 SRSF3P84103 164 aaKnown RBP16.37■□□□□ 0.21
TPM1-208ENST00000404484 ATP5G2Q06055 141 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 HAGHQ16775 308 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 OR51G1Q8NGK1 321 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 ZNF502Q8TBZ5 544 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 TMEM37Q8WXS4 190 aa16.37■□□□□ 0.21
TPM1-208ENST00000404484 LOC102723971A0A1B0GUV8 181 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 TRGV3P03979 118 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 ARL14EPLP0DKL9 152 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 PQLC2Q6ZP29 291 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 S100A7AQ86SG5 101 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 NOL4LQ96MY1 436 aaPredicted RBP16.36■□□□□ 0.21
TPM1-208ENST00000404484 MS4A10Q96PG2 267 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 DUX5Q96PT3 197 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 DOK5Q9P104 306 aa16.36■□□□□ 0.21
TPM1-208ENST00000404484 F8W735 103 aaPredicted RBP16.35■□□□□ 0.21
TPM1-208ENST00000404484 NUPL2O15504 423 aaKnown RBP16.35■□□□□ 0.21
TPM1-208ENST00000404484 EIF3GO75821 320 aaKnown RBP eCLIP16.35■□□□□ 0.21
TPM1-208ENST00000404484 HSPB1P04792 205 aaKnown RBP16.35■□□□□ 0.21
TPM1-208ENST00000404484 C8orf88P0DMB2 117 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 ORM2P19652 201 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 Q6ZS46 218 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 MIR17HGQ75NE6 70 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.35■□□□□ 0.21
TPM1-208ENST00000404484 OR1B1Q8NGR6 318 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 SPATA3Q8NHX4 192 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 Q8WTZ3 238 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 USMG5Q96IX5 58 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 LINC00052Q96N35 136 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 VAX2Q9UIW0 290 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 S4R3C0 116 aa16.35■□□□□ 0.21
TPM1-208ENST00000404484 TMEM89A2RUT3 159 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 SPATA31B1PQ5VZV4 182 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 OR2T8A6NH00 312 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 DNAJC9-AS1A6NH13 148 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 NDUFS6O75380 124 aaKnown RBP16.34■□□□□ 0.21
TPM1-208ENST00000404484 TPPP2P59282 170 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 LYZP61626 148 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 CFHR3Q02985 330 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 ICAM4Q14773 271 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 RARRES2Q99969 163 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 SLC35B3Q9H1N7 401 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 TMEM167BQ9NRX6 74 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 HIGD1AQ9Y241 93 aa16.34■□□□□ 0.21
TPM1-208ENST00000404484 OR2C1O95371 312 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 IGLV1-40P01703 118 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 SFTA3P0C7M3 94 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 GCHFRP30047 84 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 DEFA5Q01523 94 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 PATE2Q6UY27 113 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 LINC00305Q7Z4B0 112 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 STXBP6Q8NFX7 210 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 SEC11CQ9BY50 192 aa16.33■□□□□ 0.2
TPM1-208ENST00000404484 TMPRSS5Q9H3S3 457 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms